BLASTX nr result

ID: Angelica22_contig00043120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043120
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   134   6e-30
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   116   2e-24
gb|AAO23078.1| polyprotein [Glycine max]                              114   6e-24
gb|ACB28472.1| polyprotein [Ananas comosus]                           113   1e-23
gb|ABD78322.1| polyprotein [Primula vulgaris]                         112   4e-23

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/80 (80%), Positives = 70/80 (87%)
 Frame = -1

Query: 241 PTGLPPPRGDEHAILLKEGSNPVGVRPYRYPQCQKDEIEKLIQEMLKAGFIKPFKNPFSS 62
           P GLPP RG EHAI+LKEGSNPVGVRPYRYPQ QKDEIE+LI+EML AG I+P  +PFSS
Sbjct: 670 PVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIKEMLAAGIIQPSTSPFSS 729

Query: 61  PVLLVKKKDGSRHFCVDYRA 2
           PV+LVKKKDGS  FCVDYRA
Sbjct: 730 PVILVKKKDGSWRFCVDYRA 749


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/80 (71%), Positives = 63/80 (78%)
 Frame = -1

Query: 241 PTGLPPPRGDEHAILLKEGSNPVGVRPYRYPQCQKDEIEKLIQEMLKAGFIKPFKNPFSS 62
           P GLPP RG  HAI L+ G+NPV VRPYRYPQ QKDEIE+LI +ML AG I+   + FSS
Sbjct: 602 PLGLPPDRGHVHAINLQHGTNPVSVRPYRYPQSQKDEIEQLIHDMLAAGIIQQSHSAFSS 661

Query: 61  PVLLVKKKDGSRHFCVDYRA 2
           PVLLVKKKDGS  FCVDYRA
Sbjct: 662 PVLLVKKKDGSWRFCVDYRA 681


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/80 (67%), Positives = 61/80 (76%)
 Frame = -1

Query: 241 PTGLPPPRGDEHAILLKEGSNPVGVRPYRYPQCQKDEIEKLIQEMLKAGFIKPFKNPFSS 62
           P  LPP R  +HAI LK+GS PV VRPYRYP  QKD+IEK+IQEML  G I+P  +PFS 
Sbjct: 576 PASLPPQREQDHAIPLKQGSGPVKVRPYRYPHTQKDQIEKMIQEMLVQGIIQPSNSPFSL 635

Query: 61  PVLLVKKKDGSRHFCVDYRA 2
           P+LLVKKKDGS  FC DYRA
Sbjct: 636 PILLVKKKDGSWRFCTDYRA 655


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/81 (65%), Positives = 62/81 (76%)
 Frame = -1

Query: 244 EPTGLPPPRGDEHAILLKEGSNPVGVRPYRYPQCQKDEIEKLIQEMLKAGFIKPFKNPFS 65
           EP GLPP R  +H I LKEG+NP+ VRPYRYP  QK EIEKL+QEML  G I P  +P+S
Sbjct: 207 EPQGLPPVRLHDHKIPLKEGTNPINVRPYRYPAYQKTEIEKLVQEMLSQGVITPSNSPYS 266

Query: 64  SPVLLVKKKDGSRHFCVDYRA 2
           SPV+LVKKKDGS   C+DYR+
Sbjct: 267 SPVVLVKKKDGSWRLCIDYRS 287


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/81 (61%), Positives = 65/81 (80%)
 Frame = -1

Query: 244 EPTGLPPPRGDEHAILLKEGSNPVGVRPYRYPQCQKDEIEKLIQEMLKAGFIKPFKNPFS 65
           EP GLPP R   H I L +G+NP+ VRPYRYP  QK+EIEK+++E++++GFI+P ++PFS
Sbjct: 466 EPKGLPPEREHVHKIELIQGTNPISVRPYRYPYFQKNEIEKIVKELIESGFIRPSQSPFS 525

Query: 64  SPVLLVKKKDGSRHFCVDYRA 2
           SPV+LVKK DGS   CVDYRA
Sbjct: 526 SPVILVKKSDGSWRMCVDYRA 546


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