BLASTX nr result

ID: Angelica22_contig00043075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00043075
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609372.1| WD repeat-containing protein [Medicago trunc...    94   1e-17
ref|NP_189790.2| transducin/WD40 domain-containing protein [Arab...    81   1e-13
ref|NP_001190004.1| transducin/WD40 domain-containing protein [A...    81   1e-13
ref|NP_001154659.1| transducin/WD40 domain-containing protein [A...    81   1e-13
emb|CBI28216.3| unnamed protein product [Vitis vinifera]               80   1e-13

>ref|XP_003609372.1| WD repeat-containing protein [Medicago truncatula]
            gi|355510427|gb|AES91569.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 1581

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/94 (53%), Positives = 58/94 (61%)
 Frame = -3

Query: 287  RVLQRWADHVWHVEHNIWRYHLLLQLMILNHAEAPPFSGFY*T*SNFQCRAMILYVAAGA 108
            RVLQRWA +V H EHNIWRY  L+    LN                 QCRA+ILYVAAGA
Sbjct: 1438 RVLQRWAGYVLHSEHNIWRYRCLIFPFYLNSTTIHSILT-----QMTQCRALILYVAAGA 1492

Query: 107  FPEALVALREAQQPEAAAMFVVACHEIRKAFVTD 6
              EAL ALREAQ P+ AAMF++AC EI    ++D
Sbjct: 1493 LQEALAALREAQLPDTAAMFILACREIHAEIISD 1526


>ref|NP_189790.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|332644192|gb|AEE77713.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 1345

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/94 (45%), Positives = 50/94 (53%)
 Frame = -3

Query: 287  RVLQRWADHVWHVEHNIWRYHLLLQLMILNHAEAPPFSGFY*T*SNFQCRAMILYVAAGA 108
            RVLQRWADHV H EHN+WR                               A+ILYVAAG+
Sbjct: 1225 RVLQRWADHVLHAEHNVWR-------------------------------ALILYVAAGS 1253

Query: 107  FPEALVALREAQQPEAAAMFVVACHEIRKAFVTD 6
              EAL ALRE QQP+  AMFV+AC EI    +T+
Sbjct: 1254 LQEALAALREVQQPDTVAMFVLACQEIHSEIITE 1287


>ref|NP_001190004.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|332644194|gb|AEE77715.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 1376

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/94 (45%), Positives = 50/94 (53%)
 Frame = -3

Query: 287  RVLQRWADHVWHVEHNIWRYHLLLQLMILNHAEAPPFSGFY*T*SNFQCRAMILYVAAGA 108
            RVLQRWADHV H EHN+WR                               A+ILYVAAG+
Sbjct: 1256 RVLQRWADHVLHAEHNVWR-------------------------------ALILYVAAGS 1284

Query: 107  FPEALVALREAQQPEAAAMFVVACHEIRKAFVTD 6
              EAL ALRE QQP+  AMFV+AC EI    +T+
Sbjct: 1285 LQEALAALREVQQPDTVAMFVLACQEIHSEIITE 1318


>ref|NP_001154659.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|332644193|gb|AEE77714.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 1358

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/94 (45%), Positives = 50/94 (53%)
 Frame = -3

Query: 287  RVLQRWADHVWHVEHNIWRYHLLLQLMILNHAEAPPFSGFY*T*SNFQCRAMILYVAAGA 108
            RVLQRWADHV H EHN+WR                               A+ILYVAAG+
Sbjct: 1238 RVLQRWADHVLHAEHNVWR-------------------------------ALILYVAAGS 1266

Query: 107  FPEALVALREAQQPEAAAMFVVACHEIRKAFVTD 6
              EAL ALRE QQP+  AMFV+AC EI    +T+
Sbjct: 1267 LQEALAALREVQQPDTVAMFVLACQEIHSEIITE 1300


>emb|CBI28216.3| unnamed protein product [Vitis vinifera]
          Length = 1250

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/94 (46%), Positives = 52/94 (55%)
 Frame = -3

Query: 287  RVLQRWADHVWHVEHNIWRYHLLLQLMILNHAEAPPFSGFY*T*SNFQCRAMILYVAAGA 108
            RVLQRWADHV H EHNIWR                               A+ILYVAAGA
Sbjct: 1133 RVLQRWADHVLHTEHNIWR-------------------------------ALILYVAAGA 1161

Query: 107  FPEALVALREAQQPEAAAMFVVACHEIRKAFVTD 6
              EAL ALREA+ P+ AAMF+VAC EI +  +++
Sbjct: 1162 LQEALAALREAKLPDTAAMFIVACREIHEEIISN 1195


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