BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00042878
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    97   1e-18
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    95   7e-18
emb|CAB40066.1| putative protein [Arabidopsis thaliana] gi|72677...    95   7e-18
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    94   9e-18
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...    94   1e-17

>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/95 (45%), Positives = 62/95 (65%)
 Frame = +1

Query: 4   AKNKLGFVDGTVVKPDIGSVDFKAWERCNDLVCSWLLCNLDESISRSVLFFKTAREIWLD 183
           AKNK+GFVDGT+ +PD     F+ W RCN +V SWLL ++   I RS+L    A +IW D
Sbjct: 50  AKNKIGFVDGTLTRPDTSDPTFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDAADIWRD 109

Query: 184 LEDRFGYASMAQIFALEQQLSEMNQGSKSVSDFFT 288
           L  RF   ++ + F L Q++ ++ QGS S+SD++T
Sbjct: 110 LHGRFHMTNLPRTFNLTQEIQDLKQGSMSLSDYYT 144


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 40/96 (41%), Positives = 65/96 (67%)
 Frame = +1

Query: 1   SAKNKLGFVDGTVVKPDIGSVDFKAWERCNDLVCSWLLCNLDESISRSVLFFKTAREIWL 180
           + +NKLGF+DGT+VKP +   D+ AW RCND V +WL+ ++ + I +S+LF  TA  IW 
Sbjct: 70  NVRNKLGFIDGTIVKPPLDHRDYGAWSRCNDTVSTWLMNSVSKKIGQSLLFIPTAEGIWK 129

Query: 181 DLEDRFGYASMAQIFALEQQLSEMNQGSKSVSDFFT 288
           ++  RF      +++ +EQ+LS++ QGS  +S ++T
Sbjct: 130 NMLSRFKQDDAPRVYDIEQRLSKIEQGSMDISAYYT 165


>emb|CAB40066.1| putative protein [Arabidopsis thaliana] gi|7267796|emb|CAB81199.1|
           putative protein [Arabidopsis thaliana]
          Length = 294

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 40/96 (41%), Positives = 65/96 (67%)
 Frame = +1

Query: 1   SAKNKLGFVDGTVVKPDIGSVDFKAWERCNDLVCSWLLCNLDESISRSVLFFKTAREIWL 180
           + +NKLGF+DGT+VKP +   D+ AW RCND V +WL+ ++ + I +S+LF  TA  IW 
Sbjct: 70  NVRNKLGFIDGTIVKPPLDHRDYGAWSRCNDTVSTWLMNSVSKKIGQSLLFIPTAEGIWK 129

Query: 181 DLEDRFGYASMAQIFALEQQLSEMNQGSKSVSDFFT 288
           ++  RF      +++ +EQ+LS++ QGS  +S ++T
Sbjct: 130 NMLSRFKQDDAPRVYDIEQRLSKIEQGSMDISAYYT 165


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/95 (43%), Positives = 67/95 (70%)
 Frame = +1

Query: 1   SAKNKLGFVDGTVVKPDIGSVDFKAWERCNDLVCSWLLCNLDESISRSVLFFKTAREIWL 180
           SAKNKLGF+ G   KPD   + F+ W RC+D+V +WLL +L + I+ SVL+ +TA+E+W 
Sbjct: 71  SAKNKLGFITGAYKKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQ 130

Query: 181 DLEDRFGYASMAQIFALEQQLSEMNQGSKSVSDFF 285
           +LE R+G     ++F L+++L+ ++QG+  V+ +F
Sbjct: 131 ELEQRYGQIDGTKMFQLQRELNNVSQGTNDVAAYF 165


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
           gi|7268152|emb|CAB78488.1| retrovirus-related like
           polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/96 (42%), Positives = 65/96 (67%)
 Frame = +1

Query: 1   SAKNKLGFVDGTVVKPDIGSVDFKAWERCNDLVCSWLLCNLDESISRSVLFFKTAREIWL 180
           + +NKLGF++GT+ KP     DF AW RCND+V +WL+ ++D+ I +S+L+  T + IW 
Sbjct: 69  NVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGIWN 128

Query: 181 DLEDRFGYASMAQIFALEQQLSEMNQGSKSVSDFFT 288
           +L  RF      +IF +EQ+LS++ QGS  +S ++T
Sbjct: 129 NLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYT 164