BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00042854
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...    53   5e-08
ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [...    55   6e-08
ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|2...    53   3e-07
ref|XP_002876177.1| RNA recognition motif-containing protein [Ar...    51   9e-07
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu...    47   1e-06

>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score = 53.1 bits (126), Expect(3) = 5e-08
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -1

Query: 243 KNEHGGIIAGAHQIYLTFLSESTFTEQDVSIYF 145
           +N+ GGI+AG+ QIYLTF +ESTFTEQDVS YF
Sbjct: 315 RNDPGGIVAGSRQIYLTFPAESTFTEQDVSNYF 347



 Score = 25.4 bits (54), Expect(3) = 5e-08
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 313 RPRHQHCVI*VKDVQKYMDANG 248
           RP  QH VI  +DV KY++  G
Sbjct: 292 RPHGQHSVILTEDVPKYLEYAG 313



 Score = 22.3 bits (46), Expect(3) = 5e-08
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 53  NFHDQHGHVQDVTIHCQ 3
           N+  + G VQDV I CQ
Sbjct: 345 NYFSKFGPVQDVRIPCQ 361


>ref|NP_178588.1| zinc finger CCCH domain-containing protein 18 [Arabidopsis
           thaliana] gi|75337298|sp|Q9SJ41.1|C3H18_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 18;
           Short=AtC3H18 gi|4755187|gb|AAD29054.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330250805|gb|AEC05899.1| zinc finger CCCH
           domain-containing protein 18 [Arabidopsis thaliana]
          Length = 536

 Score = 54.7 bits (130), Expect(3) = 6e-08
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -1

Query: 243 KNEHGGIIAGAHQIYLTFLSESTFTEQDVSIYF 145
           +NEHG I+AG+ QIYLTF +ES+FTE DVSIYF
Sbjct: 306 RNEHGAILAGSRQIYLTFPAESSFTEHDVSIYF 338



 Score = 23.1 bits (48), Expect(3) = 6e-08
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 313 RPRHQHCVI*VKDVQKYMDANG 248
           RP  QH VI  +D  K+++  G
Sbjct: 283 RPHGQHSVILAEDASKFVEYTG 304



 Score = 23.1 bits (48), Expect(3) = 6e-08
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 50  FHDQHGHVQDVTIHCQ 3
           +   +GHV+DV I CQ
Sbjct: 337 YFTSYGHVEDVRIPCQ 352


>ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|222844564|gb|EEE82111.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 53.1 bits (126), Expect(3) = 3e-07
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -1

Query: 243 KNEHGGIIAGAHQIYLTFLSESTFTEQDVSIYF 145
           +N+ GGI+AG+ QIYLTF +ESTFTEQDVS YF
Sbjct: 298 RNDPGGIVAGSRQIYLTFPAESTFTEQDVSNYF 330



 Score = 23.5 bits (49), Expect(3) = 3e-07
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 313 RPRHQHCVI*VKDVQKYMDANG 248
           RP  QH VI  +D  KY++  G
Sbjct: 275 RPHGQHSVILAEDFPKYLEYAG 296



 Score = 21.9 bits (45), Expect(3) = 3e-07
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 53  NFHDQHGHVQDVTIHCQ 3
           N+    G VQDV I CQ
Sbjct: 328 NYFSNFGPVQDVRIPCQ 344


>ref|XP_002876177.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297322015|gb|EFH52436.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 352

 Score = 51.2 bits (121), Expect(3) = 9e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -1

Query: 243 KNEHGGIIAGAHQIYLTFLSESTFTEQDVSIYF 145
           K+EHG I+AG+ QIYLTF +ES+FTE DVS YF
Sbjct: 272 KSEHGAILAGSRQIYLTFPAESSFTEHDVSNYF 304



 Score = 25.0 bits (53), Expect(3) = 9e-07
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 313 RPRHQHCVI*VKDVQKYMDANGVK 242
           RP  QH VI  +DV K+++  G K
Sbjct: 249 RPHGQHSVILAEDVLKFVEYTGEK 272



 Score = 20.4 bits (41), Expect(3) = 9e-07
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 53  NFHDQHGHVQDVTIHCQ 3
           N+  + G V+DV I CQ
Sbjct: 302 NYFSKVGPVEDVRIPCQ 318


>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
           gi|223531534|gb|EEF33365.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 551

 Score = 47.0 bits (110), Expect(3) = 1e-06
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = -1

Query: 243 KNEHGGIIAGAHQIYLTFLSESTFTEQDVSIYF 145
           +N+ G I++G+ QIYLTF +ESTFTE DVS YF
Sbjct: 331 RNDPGPIVSGSRQIYLTFPAESTFTEDDVSNYF 363



 Score = 27.7 bits (60), Expect(3) = 1e-06
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 313 RPRHQHCVI*VKDVQKYMDANG 248
           RP  QH VI  +DV KYM+  G
Sbjct: 308 RPHGQHAVILAEDVPKYMENRG 329



 Score = 21.6 bits (44), Expect(3) = 1e-06
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 53  NFHDQHGHVQDVTIHCQ 3
           N+ ++ G V+DV I CQ
Sbjct: 361 NYFNKFGPVEDVRIPCQ 377