BLASTX nr result

ID: Angelica22_contig00042703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00042703
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    92   6e-17
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    84   9e-15
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    82   3e-14
gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    79   3e-13
ref|XP_003599995.1| hypothetical protein MTR_3g050230 [Medicago ...    78   9e-13

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/146 (34%), Positives = 72/146 (49%)
 Frame = +1

Query: 43   LCWSLWKSRNELVWNQRGTEVADVVASARVVFSQWKYAQDKTFDNYLGLMTNADGIEHWT 222
            +CW LW  RN++VWN R      VV     +   W +A +         +T       W 
Sbjct: 610  VCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHANE----TLATAVTVPSYSSKWQ 665

Query: 223  LPQDNMVKVNSDAAIFETSNCYSFSLVARNHKGELLHASSKCNMGNVTPENAEAMGVREA 402
             P    +K+N D A+F      +   V R+H+G  +   +K       P+  EA+GVRE 
Sbjct: 666  KPDYGWIKINVDGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREV 723

Query: 403  LSWIKEQQYSNVVVETDCLVVVQALR 480
            LSWI E+  S +VVETDCL VVQA++
Sbjct: 724  LSWIHERSRSRIVVETDCLRVVQAIQ 749


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/146 (30%), Positives = 75/146 (51%)
 Frame = +1

Query: 40  MLCWSLWKSRNELVWNQRGTEVADVVASARVVFSQWKYAQDKTFDNYLGLMTNADGIEHW 219
           M+ W +W+ RN+ VW+ +       V  AR +  QW+ A++        +  +      W
Sbjct: 1   MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNSATTQ---VQQSPQDTIAW 57

Query: 220 TLPQDNMVKVNSDAAIFETSNCYSFSLVARNHKGELLHASSKCNMGNVTPENAEAMGVRE 399
             P    +K N DAAIF   N +   +  R+ +G  L A++    G   P+ AEA+G+R+
Sbjct: 58  QPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRD 117

Query: 400 ALSWIKEQQYSNVVVETDCLVVVQAL 477
           A+ W+ + + SNV +E DC +VV ++
Sbjct: 118 AILWLGQLELSNVQLELDCKLVVDSI 143


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/139 (31%), Positives = 68/139 (48%)
 Frame = +1

Query: 37  AMLCWSLWKSRNELVWNQRGTEVADVVASARVVFSQWKYAQDKTFDNYLGLMTNADGIEH 216
           A++C SLW  RN  VWN++      V++ A  +  Q   AQ    +    L  N D    
Sbjct: 528 ALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRK 587

Query: 217 WTLPQDNMVKVNSDAAIFETSNCYSFSLVARNHKGELLHASSKCNMGNVTPENAEAMGVR 396
           WT P+   +K+N+D A+F          V R+  G ++ A S+  +G  T   AEA+ ++
Sbjct: 588 WTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMK 647

Query: 397 EALSWIKEQQYSNVVVETD 453
           EALS++K+ Q      E D
Sbjct: 648 EALSYMKDYQMDKCFFELD 666


>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 51/156 (32%), Positives = 71/156 (45%)
 Frame = +1

Query: 16  IKQRQEAAMLCWSLWKSRNELVWNQRGTEVADVVASARVVFSQWKYAQDKTFDNYLGLMT 195
           I Q   AAM  WSLWK RN  +W+   T    V   AR    +W Y Q     N L    
Sbjct: 40  ISQVALAAMTLWSLWKCRNSKLWDNVDTPSLVVCNRARDTLYEWSYMQHA---NNLVQEI 96

Query: 196 NADGIEHWTLPQDNMVKVNSDAAIFETSNCYSFSLVARNHKGELLHASSKCNMGNVTPEN 375
             D +  W  P   +VK N + A+F  ++   + L  R+  G  L   S      VTP  
Sbjct: 97  THDAL--WEKPPLTVVKCNVECALFNNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTPSE 154

Query: 376 AEAMGVREALSWIKEQQYSNVVVETDCLVVVQALRS 483
           AEA G+ EA+     +   +V+ ++DC +VV A+ S
Sbjct: 155 AEATGLLEAVKLAIARGMQSVIFKSDCKIVVDAVNS 190


>ref|XP_003599995.1| hypothetical protein MTR_3g050230 [Medicago truncatula]
           gi|355489043|gb|AES70246.1| hypothetical protein
           MTR_3g050230 [Medicago truncatula]
          Length = 240

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
 Frame = +1

Query: 22  QRQEAAMLCWSLWKSRNELVWNQRGTEVADVVASARVVFSQWKYA-QDKTFDNYLGLM-- 192
           Q Q  A L WS+WKSRN  VW         +V  AR +   W+ A ++K     +G    
Sbjct: 22  QSQMVATLLWSIWKSRNLRVWQNTTDTTQAIVERARFLLYNWQLANKEKQQGAAVGASVA 81

Query: 193 ---------TNADGI----EHWTLPQDNMVKVNSDAAIFETSNCYSFSLVARNHKGELLH 333
                    T  + +      W  P    +K N DA  FET NC  F L  R+  GE + 
Sbjct: 82  QPISVQTAGTTRNAVLPVQNRWQKPLQGRLKCNVDADFFETLNCVGFGLCIRDEFGEFIK 141

Query: 334 ASSKCNMGNVTPENAEAMGVREALSWIKEQQYSNVVVETDCLVVV 468
           A +  +    + +  EA+G+  A+ W++E Q  NV  E D   VV
Sbjct: 142 AKTLWSNPICSSDIGEALGLSHAIQWVQELQLPNVDFELDAKKVV 186


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