BLASTX nr result

ID: Angelica22_contig00042684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00042684
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]    82   6e-14
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated...    69   3e-10
emb|CBI17281.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_003601650.1| Small subunit processome component-like prot...    63   2e-08

>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
          Length = 2461

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/83 (54%), Positives = 63/83 (75%)
 Frame = +3

Query: 6   VQSNATLLMDLVDALDQLLLTDSENIAGFTKNTWTSLIGCCLGSYYKLHSVRQICYDEAS 185
           +Q++ +LLM LVDALDQLL+ +    AGF K+TW SL+G  LGS++KL S ++   +E +
Sbjct: 285 IQADPSLLMGLVDALDQLLMIE----AGFPKSTWQSLMGAALGSFHKLGSFKKSGVEETN 340

Query: 186 IGKFLNLAKRYKSSSQVLCTVAD 254
             KFL+LAKRY+SSSQVL +VA+
Sbjct: 341 --KFLHLAKRYRSSSQVLFSVAE 361


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
           gi|223542637|gb|EEF44174.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2535

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
 Frame = +3

Query: 3   DVQSNATLLMDLVDALDQLLLTDSENIAGFTKNTWTSLIGCCLGSYYKLHSVRQICYDEA 182
           D++   +LLMD +DALD LL+   E+IAG +K TW SL+G  L SY+K       C  E 
Sbjct: 524 DIREKPSLLMDFIDALDGLLMIGDESIAGVSKRTWQSLLGAALNSYFK-------CGKEE 576

Query: 183 S----IGKFLNLAKRYKSSSQVLCTVAD 254
           S      K L LA+ YKSSS +L  +AD
Sbjct: 577 SGLEETSKILYLARTYKSSSHILSAIAD 604


>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like
           [Glycine max]
          Length = 2653

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/82 (47%), Positives = 52/82 (63%)
 Frame = +3

Query: 6   VQSNATLLMDLVDALDQLLLTDSENIAGFTKNTWTSLIGCCLGSYYKLHSVRQICYDEAS 185
           V +N +L+++LVDA+D  L   S+ I   +K  W S+IG  L S+ +L+S      DE  
Sbjct: 543 VGANPSLMVELVDAVDNFLTVKSDCIGDMSKKAWESIIGAALSSFNRLYSNSNHGADET- 601

Query: 186 IGKFLNLAKRYKSSSQVLCTVA 251
            GKFL+LAKRYKSS QVL  VA
Sbjct: 602 -GKFLSLAKRYKSSPQVLFAVA 622


>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/60 (50%), Positives = 47/60 (78%)
 Frame = +3

Query: 6   VQSNATLLMDLVDALDQLLLTDSENIAGFTKNTWTSLIGCCLGSYYKLHSVRQICYDEAS 185
           +Q++ +LLM LVDALDQLL+ +++N+AGF K+TW SL+G  LGS++KL S ++   +E +
Sbjct: 539 IQADPSLLMGLVDALDQLLMIEADNVAGFPKSTWQSLMGAALGSFHKLGSFKKSGVEETN 598


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago
           truncatula] gi|355490698|gb|AES71901.1| Small subunit
           processome component-like protein [Medicago truncatula]
          Length = 2733

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
 Frame = +3

Query: 6   VQSNATLLMDLVDALDQLLLTDSENIAGFTKNTWTSLIGCCLGSYYKLHSVRQICYDEAS 185
           V +  +LL+DL+DA+DQLL   + +IA  +K  W S+IG  L S+ +L      CYD ++
Sbjct: 550 VDAVPSLLVDLMDAVDQLLTVKAVHIADMSKEAWESIIGASLSSFNRL------CYD-SN 602

Query: 186 IG-----KFLNLAKRYKSSSQVLCTVA 251
           +G     KFL+ AKRYKSS  VL  VA
Sbjct: 603 LGADETKKFLSFAKRYKSSPHVLPAVA 629


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