BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00042561
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...   116   2e-24
ref|XP_002517262.1| pentatricopeptide repeat-containing protein,...   103   1e-20
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat...    93   3e-17
ref|XP_003621961.1| Pentatricopeptide repeat-containing protein ...    84   1e-14
ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp....    72   4e-11

>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
           unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/102 (57%), Positives = 76/102 (74%)
 Frame = +1

Query: 1   TRVPNFLSFSIAVCNLCKLDDIDNVRHLLRIMLRNGYYLTTELVSVVLNCYCKLGRLNEA 180
           TRV NFL+FSIA+CNLC+L+D+  V  +LR+MLR GY  + E+ S+VLNC+CK+GR  EA
Sbjct: 186 TRVSNFLTFSIALCNLCRLNDLVGVGDVLRMMLRKGYCPSVEIFSMVLNCFCKVGRFAEA 245

Query: 181 LQLLGFMVTSGILISVYIRSILIDGFCRSGRLVTASFLLENM 306
            Q+LG M T GI ISV + SILIDG+ R G++  A  LLE M
Sbjct: 246 FQVLGLMATLGIPISVTVWSILIDGYRRIGKIGRAGNLLEKM 287


>ref|XP_002517262.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543633|gb|EEF45162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 321

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/99 (55%), Positives = 66/99 (66%)
 Frame = +1

Query: 10  PNFLSFSIAVCNLCKLDDIDNVRHLLRIMLRNGYYLTTELVSVVLNCYCKLGRLNEALQL 189
           PNFLS++IA+ NLCKL+D+  V+  LRIML  GYY   E   +VLNC CKLGRL EA QL
Sbjct: 140 PNFLSYNIALTNLCKLNDLVKVKKALRIMLSKGYYPNVETFEMVLNCCCKLGRLVEACQL 199

Query: 190 LGFMVTSGILISVYIRSILIDGFCRSGRLVTASFLLENM 306
           L  M+T GI +SV   SILID  CR  +   A  L+E M
Sbjct: 200 LAMMITVGISLSVSAWSILIDWLCRLNQPNMAFHLMERM 238


>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 665

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/104 (49%), Positives = 64/104 (61%)
 Frame = +1

Query: 1   TRVPNFLSFSIAVCNLCKLDDIDNVRHLLRIMLRNGYYLTTELVSVVLNCYCKLGRLNEA 180
           T +PNFL+F+I +CNL K  D+  +    R MLR GY        VVLN  CKLGRL EA
Sbjct: 192 TLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLNGLCKLGRLAEA 251

Query: 181 LQLLGFMVTSGILISVYIRSILIDGFCRSGRLVTASFLLENMAR 312
            Q+ G M T GI +SV I +I+IDGFCR  R   AS L++ M +
Sbjct: 252 YQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKK 295


>ref|XP_003621961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496976|gb|AES78179.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 646

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/102 (42%), Positives = 63/102 (61%)
 Frame = +1

Query: 1   TRVPNFLSFSIAVCNLCKLDDIDNVRHLLRIMLRNGYYLTTELVSVVLNCYCKLGRLNEA 180
           TR PNFL+F+IA+ +L   +DI NV+++LR MLR  Y       S VLN +CK+    + 
Sbjct: 139 TRSPNFLTFNIALFHLSNFNDIVNVKYVLREMLRLRYCPNASTFSAVLNAFCKMNAFRQV 198

Query: 181 LQLLGFMVTSGILISVYIRSILIDGFCRSGRLVTASFLLENM 306
            Q+LG M+  GI +SV + ++LI  FC+ G+L  A  L + M
Sbjct: 199 YQILGLMIGLGIELSVNVWTVLIHHFCKLGKLDVADDLFDKM 240


>ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336032|gb|EFH66449.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 741

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/101 (38%), Positives = 57/101 (56%)
 Frame = +1

Query: 4   RVPNFLSFSIAVCNLCKLDDIDNVRHLLRIMLRNGYYLTTELVSVVLNCYCKLGRLNEAL 183
           R  NF SF IA+ + C   D+  V+ +L+ M+  G+Y  TE    +L   C+ G + EA 
Sbjct: 306 RFRNFFSFDIALSHFCSRGDLVCVKIVLKRMIGEGFYPNTERFGQILRLCCRTGCVAEAF 365

Query: 184 QLLGFMVTSGILISVYIRSILIDGFCRSGRLVTASFLLENM 306
           Q++G M+ SGI +SV + S+L+ GF RSG    A  L   M
Sbjct: 366 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM 406