BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00042528
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...    57   3e-08
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    55   1e-07
gb|ADB85424.1| putative retrotransposon protein [Phyllostachys e...    54   2e-07
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]    56   3e-07
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              54   4e-07

>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score = 57.4 bits (137), Expect(2) = 3e-08
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = +2

Query: 47  PMRYRLLSDIYDNTXXXXXXXXXXXXXXXXPVVYDQAVKSKIWKAAMQSEIDAIEKNKTR 226
           P R R + ++YD T                P+ +D+A+K K W+ AM+ EI AIEKN T 
Sbjct: 500 PRRMRNIQELYDETEVINDLFCLFVDSK--PLNFDEAMKDKRWRQAMEEEIKAIEKNNTW 557

Query: 227 VLTDLPKGHKTIDLK 271
            L+ LPKGH+ I +K
Sbjct: 558 ELSSLPKGHEAIGVK 572



 Score = 25.0 bits (53), Expect(2) = 3e-08
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 270 KWVFKEKKDTSGEI 311
           KWVFK KK+  GE+
Sbjct: 572 KWVFKIKKNAKGEV 585


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 55.5 bits (132), Expect(2) = 1e-07
 Identities = 26/73 (35%), Positives = 40/73 (54%)
 Frame = +2

Query: 53   RYRLLSDIYDNTXXXXXXXXXXXXXXXXPVVYDQAVKSKIWKAAMQSEIDAIEKNKTRVL 232
            R+R + ++Y+ T                P+ + +A++ K W+ AM  EI +I+KN T  L
Sbjct: 810  RFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWEL 869

Query: 233  TDLPKGHKTIDLK 271
            T LP GHKTI +K
Sbjct: 870  TSLPNGHKTIGVK 882



 Score = 25.0 bits (53), Expect(2) = 1e-07
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 270 KWVFKEKKDTSGEI 311
           KWV+K KK++ GE+
Sbjct: 882 KWVYKAKKNSKGEV 895


>gb|ADB85424.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1946

 Score = 53.5 bits (127), Expect(2) = 2e-07
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
 Frame = +2

Query: 44   EPMRYRLLSDIYDN------TXXXXXXXXXXXXXXXXPVVYDQAVKSKIWKAAMQSEIDA 205
            EP+RYR + D+                          P  + +A ++  W+AAMQ E+DA
Sbjct: 1409 EPLRYRTMDDLLGEQPVPELAQHDLEAELHLAQDDGEPRSFAEAERNAAWRAAMQEEMDA 1468

Query: 206  IEKNKTRVLTDLPKGHKTIDLK 271
            +E+NKT  L DLP GH  I LK
Sbjct: 1469 VERNKTWELADLPAGHHAISLK 1490



 Score = 26.6 bits (57), Expect(2) = 2e-07
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +3

Query: 270  KWVFKEKKDTSGEII 314
            KWVFK KK+ +GE+I
Sbjct: 1490 KWVFKLKKNEAGEVI 1504


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score = 56.2 bits (134), Expect(2) = 3e-07
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = +2

Query: 137 PVVYDQAVKSKIWKAAMQSEIDAIEKNKTRVLTDLPKGHKTIDLK 271
           P  YD AV+S+ W+ AM  EI+AIE+N T  LTDLP G KTI +K
Sbjct: 578 PTTYDDAVRSEKWRLAMNQEIEAIERNNTWELTDLPSGGKTIGVK 622



 Score = 22.7 bits (47), Expect(2) = 3e-07
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 270 KWVFKEKKDTSGEI 311
           KW+FK K + +GE+
Sbjct: 622 KWIFKTKLNENGEV 635


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 53.5 bits (127), Expect(2) = 4e-07
 Identities = 25/73 (34%), Positives = 39/73 (53%)
 Frame = +2

Query: 53  RYRLLSDIYDNTXXXXXXXXXXXXXXXXPVVYDQAVKSKIWKAAMQSEIDAIEKNKTRVL 232
           R+R + ++Y+ T                P+ + +A++ K W+ AM  EI +I+KN T  L
Sbjct: 749 RFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWEL 808

Query: 233 TDLPKGHKTIDLK 271
           T LP GHK I +K
Sbjct: 809 TSLPNGHKAIGVK 821



 Score = 25.0 bits (53), Expect(2) = 4e-07
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 270 KWVFKEKKDTSGEI 311
           KWV+K KK++ GE+
Sbjct: 821 KWVYKAKKNSKGEV 834