BLASTX nr result

ID: Angelica22_contig00041986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041986
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   249   4e-64
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...   240   1e-61
ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi...   234   7e-60
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   232   5e-59
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...   230   2e-58

>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  249 bits (635), Expect = 4e-64
 Identities = 118/151 (78%), Positives = 134/151 (88%)
 Frame = +1

Query: 1    VARIRTKLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGH 180
            VARIRTKLND G+ KVPGC+SIEVDSVVHEF+V D+ H  S++I KMLDE ++LL   GH
Sbjct: 588  VARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGH 647

Query: 181  VPDTSEVLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKM 360
            VPDTSEVLYD+DE+ KE  +S HSE+LAIAFGLISTKP TTIRIVKNLRVCGNCH+AIK+
Sbjct: 648  VPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKL 707

Query: 361  ISKIYKREIIARDRNRFHHFRDGSCSCMDYW 453
            ISKI+ REIIARDRNRFHHF+DGSCSCMDYW
Sbjct: 708  ISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  240 bits (613), Expect = 1e-61
 Identities = 114/151 (75%), Positives = 130/151 (86%)
 Frame = +1

Query: 1    VARIRTKLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGH 180
            VA+IRT+LND  + KVPGC+SIEVDSVVHEF+V D+ HP S EI KMLDE +  L   G 
Sbjct: 586  VAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGF 645

Query: 181  VPDTSEVLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKM 360
            VPDTSEVLYD+DE+ KE V+S HSE+LAIAFGLISTKPGTTIRI+KNLRVCGNCH+A K+
Sbjct: 646  VPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKL 705

Query: 361  ISKIYKREIIARDRNRFHHFRDGSCSCMDYW 453
            ISKI+ REIIARDRNRFHHF+DGSCSC DYW
Sbjct: 706  ISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736


>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 736

 Score =  234 bits (598), Expect = 7e-60
 Identities = 111/151 (73%), Positives = 128/151 (84%)
 Frame = +1

Query: 1    VARIRTKLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGH 180
            VA+IRTKLND G+ KVPGCTSIE+D VVHEF+V D+ HP S  I +MLDE +RLL   G 
Sbjct: 586  VAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGF 645

Query: 181  VPDTSEVLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKM 360
            VPDTSEVLYD+DE+ KE  ++QHSE+LAIAFGLISTKPG+TIRIVKNLRVC NCH+A K+
Sbjct: 646  VPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKL 705

Query: 361  ISKIYKREIIARDRNRFHHFRDGSCSCMDYW 453
            ISKI+ REIIARDRNRFHHF+DG CSC D W
Sbjct: 706  ISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus] gi|449529868|ref|XP_004171920.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  232 bits (591), Expect = 5e-59
 Identities = 108/151 (71%), Positives = 128/151 (84%)
 Frame = +1

Query: 1    VARIRTKLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGH 180
            VARIRT+LND G+ KVPGCT+IEVD+VVHEF+V D+ HP S +I +ML+E +  L + G 
Sbjct: 584  VARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGF 643

Query: 181  VPDTSEVLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKM 360
            V DTSEVLYD+DE+ KE  +S HSE+LAIAFGLISTKPGT IRI+KNLRVC NCH+A K+
Sbjct: 644  VADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKL 703

Query: 361  ISKIYKREIIARDRNRFHHFRDGSCSCMDYW 453
            ISKI+ REIIARDRNRFHHF+DGSCSC DYW
Sbjct: 704  ISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734


>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 738

 Score =  230 bits (586), Expect = 2e-58
 Identities = 108/151 (71%), Positives = 126/151 (83%)
 Frame = +1

Query: 1    VARIRTKLNDMGITKVPGCTSIEVDSVVHEFVVSDRAHPHSREINKMLDETERLLALEGH 180
            VARIRT+LND G+ KVPGCTSIE+D  VHEF+V D+ HP    I KML+E ++LL   G 
Sbjct: 588  VARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGF 647

Query: 181  VPDTSEVLYDIDEDLKEDVISQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHTAIKM 360
            VP+TSEVLYD+DE+ KE  +SQHSE+LAI+FGLI TKPGTTIRIVKNLRVCGNCH+A K+
Sbjct: 648  VPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKL 707

Query: 361  ISKIYKREIIARDRNRFHHFRDGSCSCMDYW 453
            ISKI+ REIIARDRNRFHHF+DG CSC D W
Sbjct: 708  ISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738


Top