BLASTX nr result

ID: Angelica22_contig00041870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041870
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   117   7e-25
emb|CBI27748.3| unnamed protein product [Vitis vinifera]              117   7e-25
ref|XP_003595364.1| E3 ubiquitin-protein ligase RNF216 [Medicago...   112   3e-23
ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803...   108   3e-22
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  117 bits (294), Expect = 7e-25
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   KVPWHSGIKCGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERTEGCLSMKCRC 182
           +VPWHSGI CGEFQKL+K+ER   DI++M LAK N W RCPKCKFYVE++ GC+ ++CRC
Sbjct: 246 EVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRC 305

Query: 183 GHTFCYNCG 209
           G  FCYNCG
Sbjct: 306 GFAFCYNCG 314


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  117 bits (294), Expect = 7e-25
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = +3

Query: 3   KVPWHSGIKCGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERTEGCLSMKCRC 182
           +VPWHSGI CGEFQKL+K+ER   DI++M LAK N W RCPKCKFYVE++ GC+ ++CRC
Sbjct: 246 EVPWHSGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRC 305

Query: 183 GHTFCYNCG 209
           G  FCYNCG
Sbjct: 306 GFAFCYNCG 314


>ref|XP_003595364.1| E3 ubiquitin-protein ligase RNF216 [Medicago truncatula]
           gi|355484412|gb|AES65615.1| E3 ubiquitin-protein ligase
           RNF216 [Medicago truncatula]
          Length = 127

 Score =  112 bits (280), Expect = 3e-23
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   KVPWHSGIKCGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERTEGCLSMKCRC 182
           KV WH GI C EFQKL+ +ER   DIMLM+LAK+ +W RCP CK+YV ++EGCL MKCRC
Sbjct: 44  KVSWHDGIGCSEFQKLNADERGKNDIMLMKLAKEKQWKRCPNCKYYVAKSEGCLYMKCRC 103

Query: 183 GHTFCYNCG 209
           G  FCYNCG
Sbjct: 104 GIAFCYNCG 112


>ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803898 [Glycine max]
          Length = 685

 Score =  108 bits (271), Expect = 3e-22
 Identities = 43/69 (62%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   KVPWHSGIKCGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERTEGCLSMKCRC 182
           +VPWH  I C EFQKL+  ERE  DIMLM LAK+ +W RCP C+FYV ++EGC+ M+CRC
Sbjct: 250 RVPWHENIPCEEFQKLNAEEREREDIMLMSLAKQMQWKRCPHCRFYVAKSEGCMYMRCRC 309

Query: 183 GHTFCYNCG 209
           G++FCY CG
Sbjct: 310 GNSFCYKCG 318


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  108 bits (271), Expect = 3e-22
 Identities = 44/69 (63%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   KVPWHSGIKCGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERTEGCLSMKCRC 182
           KVPWHS I C E++ LHK+ERE  DI+LM LAK   W RCPKC+ +VE+ EGC  MKCRC
Sbjct: 221 KVPWHSQISCEEYKMLHKDERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRC 280

Query: 183 GHTFCYNCG 209
           G  FCY+CG
Sbjct: 281 GTQFCYSCG 289


Top