BLASTX nr result

ID: Angelica22_contig00041858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041858
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15151.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...   177   1e-42
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...   175   4e-42
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...   175   4e-42
gb|AFK36169.1| unknown [Lotus japonicus]                              172   3e-41

>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/110 (75%), Positives = 102/110 (92%)
 Frame = +2

Query: 2    RDQLEGLLERVEIDLASNPDDLESIQKAITSGYFPNSARLQKNEAYKTFKYSQTAHIHPS 181
            RDQLEGLLERVEI+LASNP+DL++I+K+IT+G+FP+SARLQKN +Y+T K+ QT HIHPS
Sbjct: 829  RDQLEGLLERVEIELASNPNDLDAIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPS 888

Query: 182  SGLAFEFPKLVVYNELVLTSKEYMRQVTELKPKWLVEIAPHYYQLKDVKD 331
            SGLA   P+ V+Y+ELVLT+KEYMRQVTELKP+WLVEIAPH+YQLKDV+D
Sbjct: 889  SGLAQVLPRWVIYHELVLTTKEYMRQVTELKPEWLVEIAPHFYQLKDVED 938


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/110 (75%), Positives = 102/110 (92%)
 Frame = +2

Query: 2    RDQLEGLLERVEIDLASNPDDLESIQKAITSGYFPNSARLQKNEAYKTFKYSQTAHIHPS 181
            RDQLEGLLERVEI+LASNP+DL++I+K+IT+G+FP+SARLQKN +Y+T K+ QT HIHPS
Sbjct: 931  RDQLEGLLERVEIELASNPNDLDAIKKSITAGFFPHSARLQKNGSYRTVKHPQTVHIHPS 990

Query: 182  SGLAFEFPKLVVYNELVLTSKEYMRQVTELKPKWLVEIAPHYYQLKDVKD 331
            SGLA   P+ V+Y+ELVLT+KEYMRQVTELKP+WLVEIAPH+YQLKDV+D
Sbjct: 991  SGLAQVLPRWVIYHELVLTTKEYMRQVTELKPEWLVEIAPHFYQLKDVED 1040


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/110 (76%), Positives = 100/110 (90%)
 Frame = +2

Query: 2    RDQLEGLLERVEIDLASNPDDLESIQKAITSGYFPNSARLQKNEAYKTFKYSQTAHIHPS 181
            RDQL GLLERVEI+L SN +DL++I+K+ITSG+FP+SARLQKN +Y+T K+SQT HIHPS
Sbjct: 912  RDQLAGLLERVEIELTSNANDLDAIKKSITSGFFPHSARLQKNGSYRTVKHSQTVHIHPS 971

Query: 182  SGLAFEFPKLVVYNELVLTSKEYMRQVTELKPKWLVEIAPHYYQLKDVKD 331
            SGLA   P+ VVY+ELVLT+KEYMRQVTELKP+WLVEIAPHYYQLKDV+D
Sbjct: 972  SGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 1021


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
            helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/110 (76%), Positives = 100/110 (90%)
 Frame = +2

Query: 2    RDQLEGLLERVEIDLASNPDDLESIQKAITSGYFPNSARLQKNEAYKTFKYSQTAHIHPS 181
            RDQL GLLERVEI+L SN +DL++I+K+ITSG+FP+SARLQKN +Y+T K+SQT HIHPS
Sbjct: 921  RDQLAGLLERVEIELTSNANDLDAIKKSITSGFFPHSARLQKNGSYRTVKHSQTVHIHPS 980

Query: 182  SGLAFEFPKLVVYNELVLTSKEYMRQVTELKPKWLVEIAPHYYQLKDVKD 331
            SGLA   P+ VVY+ELVLT+KEYMRQVTELKP+WLVEIAPHYYQLKDV+D
Sbjct: 981  SGLAQVLPRWVVYHELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 1030


>gb|AFK36169.1| unknown [Lotus japonicus]
          Length = 194

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/110 (74%), Positives = 98/110 (89%)
 Frame = +2

Query: 2   RDQLEGLLERVEIDLASNPDDLESIQKAITSGYFPNSARLQKNEAYKTFKYSQTAHIHPS 181
           RDQL GLLERVEI+L SNP+DL++++K+ITSG+FP+SARLQKN +Y+T K+ QT HIHPS
Sbjct: 71  RDQLAGLLERVEIELTSNPNDLDAVKKSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPS 130

Query: 182 SGLAFEFPKLVVYNELVLTSKEYMRQVTELKPKWLVEIAPHYYQLKDVKD 331
            GLA   P+ VVY ELVLT+KEYMRQVTELKP+WLVEIAPHYYQLKDV+D
Sbjct: 131 LGLAQILPRWVVYYELVLTTKEYMRQVTELKPEWLVEIAPHYYQLKDVED 180


Top