BLASTX nr result

ID: Angelica22_contig00041701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041701
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281240.2| PREDICTED: transcription regulatory protein ...   103   1e-20
emb|CBI26213.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]   103   1e-20
ref|XP_002311608.1| chromatin remodeling complex subunit [Populu...    96   2e-18
ref|XP_003592449.1| Chromatin remodeling complex subunit [Medica...    95   5e-18

>ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
           vinifera]
          Length = 1114

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
 Frame = -3

Query: 255 RMVEESKNERLTMLLGKTNELLVRLGAAVQRQKDAEH-DGIEALNDLETDMPDYSPSKT- 82
           RMV+ESKNERLTMLL KTN+LLV LGAAVQRQK AE  DGIE L   E D+PD S SK+ 
Sbjct: 296 RMVKESKNERLTMLLKKTNDLLVDLGAAVQRQKGAEQSDGIETLKSPEPDLPDLSASKSE 355

Query: 81  -----GKEDVDMIDVEPDQDGKRGDLLEGQRQ 1
                 +EDV++++ +P  +GK GDLLEGQRQ
Sbjct: 356 TPDLLPEEDVEILNTDPGPNGKTGDLLEGQRQ 387


>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
 Frame = -3

Query: 255 RMVEESKNERLTMLLGKTNELLVRLGAAVQRQKDAEH-DGIEALNDLETDMPDYSPSKT- 82
           RMV+ESKNERLTMLL KTN+LLV LGAAVQRQK AE  DGIE L   E D+PD S SK+ 
Sbjct: 285 RMVKESKNERLTMLLKKTNDLLVDLGAAVQRQKGAEQSDGIETLKSPEPDLPDLSASKSE 344

Query: 81  -----GKEDVDMIDVEPDQDGKRGDLLEGQRQ 1
                 +EDV++++ +P  +GK GDLLEGQRQ
Sbjct: 345 TPDLLPEEDVEILNTDPGPNGKTGDLLEGQRQ 376


>emb|CAN75986.1| hypothetical protein VITISV_012191 [Vitis vinifera]
          Length = 568

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
 Frame = -3

Query: 255 RMVEESKNERLTMLLGKTNELLVRLGAAVQRQKDAEH-DGIEALNDLETDMPDYSPSKT- 82
           RMV+ESKNERLTMLL KTN+LLV LGAAVQRQK AE  DGIE L   E D+PD S SK+ 
Sbjct: 270 RMVKESKNERLTMLLKKTNDLLVDLGAAVQRQKGAEQSDGIETLKSPEPDLPDLSASKSE 329

Query: 81  -----GKEDVDMIDVEPDQDGKRGDLLEGQRQ 1
                 +EDV++++ +P  +GK GDLLEGQRQ
Sbjct: 330 TPDLLPEEDVEILNTDPGPNGKTGDLLEGQRQ 361


>ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222851428|gb|EEE88975.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1131

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 57/92 (61%), Positives = 67/92 (72%), Gaps = 7/92 (7%)
 Frame = -3

Query: 255 RMVEESKNERLTMLLGKTNELLVRLGAAVQRQKDAEH-DGIEALNDLETDMPDY------ 97
           RMV+ESKNERLTMLL +TN+LLV LGAAVQRQKDA+H DGIE L DLE D P+       
Sbjct: 304 RMVKESKNERLTMLLEETNKLLVNLGAAVQRQKDAKHSDGIEPLKDLEADSPELDASRNE 363

Query: 96  SPSKTGKEDVDMIDVEPDQDGKRGDLLEGQRQ 1
           SP  T  E+ ++ID + + D   GDLLEGQRQ
Sbjct: 364 SPLDTCPEEDEIIDSDVNDDS--GDLLEGQRQ 393


>ref|XP_003592449.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355481497|gb|AES62700.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1083

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/93 (59%), Positives = 65/93 (69%), Gaps = 8/93 (8%)
 Frame = -3

Query: 255 RMVEESKNERLTMLLGKTNELLVRLGAAVQRQKDAEH-DGIEALNDLETDMPDYSPSKTG 79
           RMV+ESKNERLT+LL +TN+LLV LGAAVQRQKD +H DGIE L D E D+P+   SK G
Sbjct: 261 RMVKESKNERLTVLLEETNKLLVNLGAAVQRQKDFKHSDGIEPLEDSEADLPESDASKNG 320

Query: 78  -------KEDVDMIDVEPDQDGKRGDLLEGQRQ 1
                   +D+D ID +   DG   DLLEGQRQ
Sbjct: 321 IYKESPVDDDIDAIDSD-HNDGDSNDLLEGQRQ 352


Top