BLASTX nr result

ID: Angelica22_contig00041686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041686
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   136   2e-30
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/109 (64%), Positives = 85/109 (77%)
 Frame = -3

Query: 399 THKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAVTTYQQMLLKGVRPDKHTLPRILSVSK 220
           TH+  DE+P S +TFAWN LIQTHL NG+ DR V+TY+QMLL+GVRPDKHT+PRIL+ ++
Sbjct: 46  THQLFDEIPVS-NTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAAR 104

Query: 219 LLGSLRLGKQLHGQAIKYDLSSCHYVHSALIELYGRLDGAEAAKWVFDK 73
              S   GKQ+HG A+K  LSS  YV SAL+E+YGRLDGA AAK VF K
Sbjct: 105 HTSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCK 153


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  136 bits (343), Expect = 2e-30
 Identities = 69/109 (63%), Positives = 85/109 (77%)
 Frame = -3

Query: 399 THKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAVTTYQQMLLKGVRPDKHTLPRILSVSK 220
           TH+  DE+P S +TFAWN LIQTHL NG+  R V+TY+QMLL+GVRPDKHT+PRIL+ ++
Sbjct: 141 THQLFDEIPVS-NTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAAR 199

Query: 219 LLGSLRLGKQLHGQAIKYDLSSCHYVHSALIELYGRLDGAEAAKWVFDK 73
              S   GKQ+HG A+K  LSS  YV SAL+E+YGRLDGA+AAK VF K
Sbjct: 200 HTSSFSFGKQVHGHALKLGLSSESYVISALLEMYGRLDGABAAKLVFCK 248


>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/109 (58%), Positives = 79/109 (72%)
 Frame = -3

Query: 399 THKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAVTTYQQMLLKGVRPDKHTLPRILSVSK 220
           THK LDE+P S  TFAWN LI THL N +   A++ Y  M+++G  PD+ TLPR+L+ S+
Sbjct: 47  THKVLDEIPLSD-TFAWNNLIHTHLSNRDPGGALSIYHHMMMRGACPDRRTLPRVLTASR 105

Query: 219 LLGSLRLGKQLHGQAIKYDLSSCHYVHSALIELYGRLDGAEAAKWVFDK 73
           + G L LGKQLHGQAIK      HYV +ALIE+YGRLDG EA KW+FDK
Sbjct: 106 ICGDLFLGKQLHGQAIKLGFFDEHYVITALIEIYGRLDGIEAGKWLFDK 154


>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 429

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/108 (56%), Positives = 78/108 (72%)
 Frame = -3

Query: 396 HKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAVTTYQQMLLKGVRPDKHTLPRILSVSKL 217
           H+  D++P    TFAWN LIQTHL NG+    ++TY+QML +GVRPDKHTLPRI+  ++ 
Sbjct: 13  HQVFDDIP-IWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 71

Query: 216 LGSLRLGKQLHGQAIKYDLSSCHYVHSALIELYGRLDGAEAAKWVFDK 73
            G L++GKQLH QA K   SS  YV ++LIELYG LD A+ AKW+ DK
Sbjct: 72  YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDK 119


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/108 (56%), Positives = 78/108 (72%)
 Frame = -3

Query: 396 HKPLDEMPDSKHTFAWNTLIQTHLRNGNFDRAVTTYQQMLLKGVRPDKHTLPRILSVSKL 217
           H+  D++P    TFAWN LIQTHL NG+    ++TY+QML +GVRPDKHTLPRI+  ++ 
Sbjct: 13  HQVFDDIP-IWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 71

Query: 216 LGSLRLGKQLHGQAIKYDLSSCHYVHSALIELYGRLDGAEAAKWVFDK 73
            G L++GKQLH QA K   SS  YV ++LIELYG LD A+ AKW+ DK
Sbjct: 72  YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDK 119


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