BLASTX nr result

ID: Angelica22_contig00041647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041647
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226...    86   3e-22
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...    83   2e-21
emb|CCI55402.1| PH01B015M02.3 [Phyllostachys edulis]                   89   8e-21
gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group...    79   6e-20
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...    79   3e-19

>ref|XP_004171846.1| PREDICTED: uncharacterized protein LOC101226793 [Cucumis sativus]
          Length = 407

 Score = 86.3 bits (212), Expect(2) = 3e-22
 Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
 Frame = +3

Query: 159 NLTQLNDDEPTLPLI------ECGASNKDTLLLNEEGVIPKLSTGLEDGKDSNVWYLDNG 320
           +LT + ++EPTL +             +D +LLN+E ++P++    ++G++++VWYLDNG
Sbjct: 284 HLTCVVEEEPTLMMAMSQEGTRTRCDQEDAILLNKERLLPEMYCNDKNGENNDVWYLDNG 343

Query: 321 ASNHKTGQRSKFKELDEKVTGQVKLGNDSTVSIREK 428
           ASNH  G R KF+ELDE  TG+VK G+ ST+ I EK
Sbjct: 344 ASNHMIGHREKFQELDESFTGKVKFGDGSTIQIMEK 379



 Score = 43.5 bits (101), Expect(2) = 3e-22
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = +1

Query: 1   QKQAEDGSNNSNQSRDRSTVKCYNCSVYGHYASEYR 108
           Q  A   SN  N +RD+S +KC+ C+  GHYA EYR
Sbjct: 240 QNSAGGTSNTGNGTRDKSHIKCFTCNKMGHYALEYR 275


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1409

 Score = 82.8 bits (203), Expect(2) = 2e-21
 Identities = 40/70 (57%), Positives = 51/70 (72%)
 Frame = +3

Query: 231 LLLNEEGVIPKLSTGLEDGKDSNVWYLDNGASNHKTGQRSKFKELDEKVTGQVKLGNDST 410
           L++ E+ V PKL      G   +VW+LDNGASNH TG RSKF+ELDE +TG+VK G+ ST
Sbjct: 339 LVVREQRVWPKLLLADAGGHAGDVWFLDNGASNHMTGDRSKFRELDESITGRVKFGDAST 398

Query: 411 VSIREKGSIV 440
           V I+ KGSI+
Sbjct: 399 VQIKGKGSIL 408



 Score = 44.7 bits (104), Expect(2) = 2e-21
 Identities = 14/41 (34%), Positives = 28/41 (68%)
 Frame = +1

Query: 7   QAEDGSNNSNQSRDRSTVKCYNCSVYGHYASEYRKPRRERG 129
           + + G+ +    RD+S +KC+NC  YGHY+++   P++++G
Sbjct: 269 RGDSGAGSGGGGRDKSHIKCFNCEEYGHYSNQCPHPKKKKG 309


>emb|CCI55402.1| PH01B015M02.3 [Phyllostachys edulis]
          Length = 478

 Score = 88.6 bits (218), Expect(2) = 8e-21
 Identities = 44/88 (50%), Positives = 60/88 (68%)
 Frame = +3

Query: 177 DDEPTLPLIECGASNKDTLLLNEEGVIPKLSTGLEDGKDSNVWYLDNGASNHKTGQRSKF 356
           DD+PTL L  C       ++LNEE V+PKL T   +   ++ WYLD+ ASNH TG RS F
Sbjct: 267 DDDPTLLLSLCVNKAPVMVMLNEENVLPKLRTEGGNHDHTDEWYLDSRASNHMTGDRSMF 326

Query: 357 KELDEKVTGQVKLGNDSTVSIREKGSIV 440
            ELDEK++G++K GN STV I+ KG+++
Sbjct: 327 HELDEKISGEIKFGNCSTVQIKGKGTML 354



 Score = 36.6 bits (83), Expect(2) = 8e-21
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 49  RSTVKCYNCSVYGHYASEYR-KPRRERGAVIR 141
           RS +KC+NC  YGHYAS  R K + E   +IR
Sbjct: 230 RSHIKCFNCDKYGHYASNCRNKKKNEEVNLIR 261


>gb|AAN65018.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711344|gb|ABF99139.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1394

 Score = 79.3 bits (194), Expect(2) = 6e-20
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = +3

Query: 231 LLLNEEGVIPKLSTGLEDGKDSNVWYLDNGASNHKTGQRSKFKELDEKVTGQVKLGNDST 410
           ++++E+ V PKL          NVWYLDNGASNH TG R KF+ELDE +TG V+ G+ S+
Sbjct: 316 MVVHEDRVWPKLLLADSGAMAGNVWYLDNGASNHMTGDRKKFRELDESITGSVRFGDASS 375

Query: 411 VSIREKGSIV 440
           V I+ KGSI+
Sbjct: 376 VQIKGKGSIL 385



 Score = 42.7 bits (99), Expect(2) = 6e-20
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +1

Query: 7   QAEDGSNNSNQSRDRSTVKCYNCSVYGHYASEYRKPRRERG 129
           +    S +    RD+S +KC+NC  YGHY+++   P++++G
Sbjct: 246 RGNSASGSGGGGRDKSHIKCFNCEEYGHYSNQCPHPKKKKG 286


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score = 79.0 bits (193), Expect(2) = 3e-19
 Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
 Frame = +3

Query: 159 NLTQLNDDEPTLPLIEC----GASNKDTL---LLNEEGVIPKLSTGLEDGKDSNVWYLDN 317
           +L Q  D  PTL L        AS +D L   +++EE V P+L    +     ++WYLDN
Sbjct: 259 HLAQTEDAGPTLLLAVTEAVQNASRQDALCGLVVHEERVWPRLMLAEKGAAAGDLWYLDN 318

Query: 318 GASNHKTGQRSKFKELDEKVTGQVKLGNDSTVSIREKGSIV 440
           GASNH +G   KF+ELDE VTGQV+ G+ S+V I  KGSI+
Sbjct: 319 GASNHMSGDHRKFRELDETVTGQVRFGDASSVQIMGKGSIL 359



 Score = 40.8 bits (94), Expect(2) = 3e-19
 Identities = 13/36 (36%), Positives = 25/36 (69%)
 Frame = +1

Query: 19  GSNNSNQSRDRSTVKCYNCSVYGHYASEYRKPRRER 126
           GS   +  RD+S +KC+NC  +GHY+++   P++++
Sbjct: 220 GSGGGSGGRDKSHIKCFNCEEFGHYSTQCPHPKKKK 255


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