BLASTX nr result

ID: Angelica22_contig00041614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041614
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK63415.1| CCCH type zinc finger protein [Brassica rapa]           44   2e-07

>gb|ADK63415.1| CCCH type zinc finger protein [Brassica rapa]
          Length = 556

 Score = 43.9 bits (102), Expect(2) = 2e-07
 Identities = 20/39 (51%), Positives = 22/39 (56%)
 Frame = -1

Query: 211 PDENVQRSDPRKFHYGSVPLLDSHFGLAWRTDMLIYGHG 95
           P EN +R DPRKFHY  VP  D   G   R DM  + HG
Sbjct: 123 PGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEFAHG 161



 Score = 35.8 bits (81), Expect(2) = 2e-07
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3

Query: 104 WSWQSQYGTQPCKDGISCKYRVCFF 30
           W   +QY T+ CKDG  C  RVCFF
Sbjct: 166 WLHPAQYRTRLCKDGTGCARRVCFF 190


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