BLASTX nr result

ID: Angelica22_contig00041478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041478
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006732333.1| capsid protein [Dahlia mosaic virus] gi|3132...   166   3e-39
gb|ADY76948.1| coat protein [Carnation etched ring virus] gi|352...   164   2e-38
emb|CAH68828.1| coat protein [Carnation etched ring virus]            163   3e-38
ref|NP_612576.1| Coat protein [Carnation etched ring virus] gi|1...   163   3e-38
gb|AFI61741.1| capsid protein [Cauliflower mosaic virus]              158   1e-36

>ref|YP_006732333.1| capsid protein [Dahlia mosaic virus] gi|31323288|gb|AAP44110.1|
           putative capsid protein [Dahlia mosaic virus]
           gi|404435873|gb|AFR69282.1| capsid protein [Dahlia
           mosaic virus]
          Length = 491

 Score =  166 bits (421), Expect = 3e-39
 Identities = 89/231 (38%), Positives = 130/231 (56%), Gaps = 6/231 (2%)
 Frame = -2

Query: 676 IYTMFLGINLV-NAKEQEMDKIKEQAKLALSKMQLCDICSLEPFFCAYEKHLIDTSDQTG 500
           +YTMFLG++ V NA EQE  K++++A  A++K QLCDIC L+ F C +EK+ I+  D   
Sbjct: 234 LYTMFLGLDYVSNALEQEQ-KLRQKAVDAMTKAQLCDICRLDEFTCLFEKN-INLVDLKD 291

Query: 499 YHNYVIEYMRKIPIVGEKALTRFNESKDDVTKHSLAFAHNLVKQEITKYCDFTRXXXXXX 320
           Y  ++  Y+RKIPI+G++A  R+ +     +KHS+AFA  +VK EI KYCDF +      
Sbjct: 292 YPIWIDVYLRKIPIIGQQARNRWEKEATIPSKHSIAFATRIVKDEIAKYCDFRKTSKQLK 351

Query: 319 XXXXXXXXKFQEEDYTFG-----CKPVYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
                   +++E +Y  G     CKP Y                                
Sbjct: 352 SFGQRCCNQYKEPNYNIGCKEPTCKPTYKKKKYTRPKPKYKKWVKKKRKFQPGKFFKKKP 411

Query: 154 XXXKQVSTNKQKFCPKGKKNCRCWVCNEEGHYANECPNRKKHPDKIKMLEE 2
              ++    K+ FCP+GKK CRCW+C+EEGHYANECP+RK +P+K+ +L+E
Sbjct: 412 KGDEK---PKRNFCPQGKKKCRCWICSEEGHYANECPSRKSYPEKVSLLQE 459


>gb|ADY76948.1| coat protein [Carnation etched ring virus]
           gi|352144787|gb|AEQ61913.1| coat protein [Carnation
           etched ring virus]
          Length = 444

 Score =  164 bits (414), Expect = 2e-38
 Identities = 88/224 (39%), Positives = 120/224 (53%)
 Frame = -2

Query: 676 IYTMFLGINLVNAKEQEMDKIKEQAKLALSKMQLCDICSLEPFFCAYEKHLIDTSDQTGY 497
           +YTMFLG +    +E+ +++ + +A+L L  +QLCDICSL+ FFC YE +L     Q  Y
Sbjct: 193 LYTMFLGEDYTGNQEKTLEQERAKARLRLINLQLCDICSLQSFFCDYESNLYKLP-QNEY 251

Query: 496 HNYVIEYMRKIPIVGEKALTRFNESKDDVTKHSLAFAHNLVKQEITKYCDFTRXXXXXXX 317
            + V +Y+ KIPIVGEKA  RF E     T +SL FAH LV +E+ K C+ ++       
Sbjct: 252 PSLVKQYLAKIPIVGEKASKRFEEEASAATSYSLGFAHKLVNEELAKICELSKKQKKLKR 311

Query: 316 XXXXXXXKFQEEDYTFGCKPVYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQV 137
                   F E+ Y +GCKP Y+                                   + 
Sbjct: 312 FNKNCCSTF-EKPYEYGCKPSYSKKKKYSKKYKPKYTKYKVIRKKKKFSPGKYFKPKDKK 370

Query: 136 STNKQKFCPKGKKNCRCWVCNEEGHYANECPNRKKHPDKIKMLE 5
           S  K K+CPKGKK CRCWVCN EGHYANECPNR+   +K K+++
Sbjct: 371 S-EKAKYCPKGKKTCRCWVCNIEGHYANECPNRQT-SEKFKLIQ 412


>emb|CAH68828.1| coat protein [Carnation etched ring virus]
          Length = 493

 Score =  163 bits (413), Expect = 3e-38
 Identities = 88/224 (39%), Positives = 119/224 (53%)
 Frame = -2

Query: 676 IYTMFLGINLVNAKEQEMDKIKEQAKLALSKMQLCDICSLEPFFCAYEKHLIDTSDQTGY 497
           +YTMFLG +    +E+ +++ + +A L L  +QLCDICSL+ FFC YE +L     Q  Y
Sbjct: 226 LYTMFLGEDYTGNQEKTLEQERAKASLRLINLQLCDICSLQSFFCPYESNLYKLP-QNEY 284

Query: 496 HNYVIEYMRKIPIVGEKALTRFNESKDDVTKHSLAFAHNLVKQEITKYCDFTRXXXXXXX 317
            + V +Y+ KIPIVGEKA  RF E     T +SL FAH LV +E+ K C+ ++       
Sbjct: 285 PSLVKQYLAKIPIVGEKASKRFEEEASAATSYSLGFAHKLVNEELAKICELSKKQKKLKR 344

Query: 316 XXXXXXXKFQEEDYTFGCKPVYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQV 137
                   F E+ Y +GCKP Y+                                   + 
Sbjct: 345 FNKNCCSTF-EKPYEYGCKPSYSKKKKYSKKYKPKYTKYKVIREKKKFSPGKYFKPKDKK 403

Query: 136 STNKQKFCPKGKKNCRCWVCNEEGHYANECPNRKKHPDKIKMLE 5
           S  K K+CPKGKK CRCWVCN EGHYANECPNR+   +K K+++
Sbjct: 404 S-EKAKYCPKGKKTCRCWVCNIEGHYANECPNRQT-SEKFKLIQ 445


>ref|NP_612576.1| Coat protein [Carnation etched ring virus]
           gi|116723|sp|P05399.1|CAPSD_CERV RecName: Full=Probable
           capsid protein; Short=CP; AltName: Full=Coat protein
           gi|58862|emb|CAA28359.1| unnamed protein product
           [Carnation etched ring virus] gi|225355|prf||1301227D
           ORF 4
          Length = 494

 Score =  163 bits (412), Expect = 3e-38
 Identities = 88/224 (39%), Positives = 119/224 (53%)
 Frame = -2

Query: 676 IYTMFLGINLVNAKEQEMDKIKEQAKLALSKMQLCDICSLEPFFCAYEKHLIDTSDQTGY 497
           +YTMFLG +    +E+ +++ + +A L L  +QLCDICSL+ FFC YE +L     Q  Y
Sbjct: 227 LYTMFLGEDYTGNQEKTLEQERAKASLRLINLQLCDICSLQSFFCDYESNLYKLP-QNEY 285

Query: 496 HNYVIEYMRKIPIVGEKALTRFNESKDDVTKHSLAFAHNLVKQEITKYCDFTRXXXXXXX 317
            + V +Y+ KIPIVGEKA  RF E     T +SL FAH LV +E+ K C+ ++       
Sbjct: 286 PSLVKQYLAKIPIVGEKASKRFEEEASAATSYSLGFAHKLVNEELAKICELSKKQKKLKR 345

Query: 316 XXXXXXXKFQEEDYTFGCKPVYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQV 137
                   F E+ Y +GCKP Y+                                   + 
Sbjct: 346 FNKNCCSTF-EKPYEYGCKPSYSKKKKYSKKYKPKYTKYKVIRKKKKFSPGKYFKPKDKK 404

Query: 136 STNKQKFCPKGKKNCRCWVCNEEGHYANECPNRKKHPDKIKMLE 5
           S  K K+CPKGKK CRCWVCN EGHYANECPNR+   +K K+++
Sbjct: 405 S-EKAKYCPKGKKTCRCWVCNIEGHYANECPNRQT-SEKFKLIQ 446


>gb|AFI61741.1| capsid protein [Cauliflower mosaic virus]
          Length = 487

 Score =  158 bits (399), Expect = 1e-36
 Identities = 86/226 (38%), Positives = 123/226 (54%)
 Frame = -2

Query: 679 AIYTMFLGINLVNAKEQEMDKIKEQAKLALSKMQLCDICSLEPFFCAYEKHLIDTSDQTG 500
           A+YTMFLG+N  + K  E  + +E+AK+ ++K+QLCDIC LE F C YEK++  T +   
Sbjct: 220 AMYTMFLGLNYSDNKVAEKIEEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKT-ELAD 278

Query: 499 YHNYVIEYMRKIPIVGEKALTRFNESKDDVTKHSLAFAHNLVKQEITKYCDFTRXXXXXX 320
           +  Y+ +Y+ KIPI+GEKALTRF    +  + +SL FA  +VK+E++K CD T+      
Sbjct: 279 FPGYINQYLSKIPIIGEKALTRFRHEANGTSIYSLGFAAKIVKEELSKICDLTK-KQKKL 337

Query: 319 XXXXXXXXKFQEEDYTFGCKPVYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQ 140
                      E    +GCK                                      K+
Sbjct: 338 KKFNKKCCSIGEASVEYGCKKT---SKKKYHKRYKKKYKVYKPYKKKKKFRSGKYFKPKE 394

Query: 139 VSTNKQKFCPKGKKNCRCWVCNEEGHYANECPNRKKHPDKIKMLEE 2
              +KQK+CPKGKK+CRCW+CN EGHYANECPNR+   +K  +L++
Sbjct: 395 KKGSKQKYCPKGKKDCRCWICNIEGHYANECPNRQS-SEKAHILQQ 439


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