BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041376
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521555.1| pentatricopeptide repeat-containing protein,...   161   5e-38
ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_002865063.1| pentatricopeptide repeat-containing protein ...   135   5e-30
ref|NP_201451.1| pentatricopeptide repeat-containing protein [Ar...   131   5e-29

>ref|XP_002521555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539233|gb|EEF40826.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 418

 Score =  161 bits (408), Expect = 5e-38
 Identities = 86/173 (49%), Positives = 109/173 (63%)
 Frame = +1

Query: 4   WHTLILSNCIRISKHECHTLQTAPNLFDVMSERXXXXXXXXXXXYTRNGDFQASWDLFHC 183
           +   +  NC +I K  C       +LFD    R           ++R GDF A+W LF+ 
Sbjct: 10  YRNFLTKNCRKIVKL-CSRYVHTHHLFDEFPHRSLYSLNSQLASFSRLGDFLATWALFYR 68

Query: 184 MHRVRSDLNSYTFTPTLGACSALVNPVRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGL 363
           MH    DL++YTFTP L ACSAL    RG+QVH+LMIK G D   I KTAL++MYSK+G 
Sbjct: 69  MHCACLDLDAYTFTPVLSACSALPGAERGKQVHALMIKAGTDLGPIAKTALIDMYSKYGY 128

Query: 364 LGDTVLAFEEIGFKDVVTWNAMLSSFLHHNLPLKALDVFREMREQRVVFSEFS 522
           LGD+V AFEE+ F+DVVTWN++LSSFL H L  KAL +F  MR + V FSEF+
Sbjct: 129 LGDSVKAFEEVEFRDVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVEFSEFT 181



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/107 (30%), Positives = 55/107 (51%)
 Frame = +1

Query: 169 DLFHCMHRVRSDLNSYTFTPTLGACSALVNPVRGRQVHSLMIKLGLDSEVITKTALMNMY 348
           + F  M  +R   N+   T  L ACS       G Q+H   I+ G  S+      L++MY
Sbjct: 264 EAFSIMRTMRP--NAVALTSALVACSENSVLWNGVQIHCAAIRFGFTSDTQLCNKLIDMY 321

Query: 349 SKFGLLGDTVLAFEEIGFKDVVTWNAMLSSFLHHNLPLKALDVFREM 489
           +K G + +    F+ I  KDVV+W +M+ ++  H    +AL++F++M
Sbjct: 322 AKCGKILNARSVFDGIFRKDVVSWTSMIDAYGRHGNGYEALELFKKM 368


>ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|222853155|gb|EEE90702.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/149 (53%), Positives = 103/149 (69%)
 Frame = +1

Query: 76  NLFDVMSERXXXXXXXXXXXYTRNGDFQASWDLFHCMHRVRSDLNSYTFTPTLGACSALV 255
           NLFD +  R           Y+R+G+F A+WDLF  +H    DL++YTFTP L ACSAL 
Sbjct: 47  NLFDELPHRDLYSLNSQLASYSRDGNFLATWDLFSRIHSAFLDLDAYTFTPVLRACSALP 106

Query: 256 NPVRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGLLGDTVLAFEEIGFKDVVTWNAMLS 435
           +   GRQVH+LMIK G D   ITKTA+M+MYSK+G LG++V  FEE+ F+DVVTWNA++S
Sbjct: 107 DTKCGRQVHALMIKTGTDLGTITKTAVMDMYSKYGCLGESVKVFEEMEFRDVVTWNALVS 166

Query: 436 SFLHHNLPLKALDVFREMREQRVVFSEFS 522
           SFL H L  +AL VFR MR + V  +EF+
Sbjct: 167 SFLRHGLAKEALGVFRAMRRESVEITEFT 195



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
 Frame = +1

Query: 40  SKHECHTLQTAPNLFDVMSERXXXXXXXXXXXYTRNGDFQASWDLFHCMHRVRSDLNSYT 219
           SK+ C  L  +  +F+ M  R           + R+G  + +  +F  M R   ++  +T
Sbjct: 138 SKYGC--LGESVKVFEEMEFRDVVTWNALVSSFLRHGLAKEALGVFRAMRRESVEITEFT 195

Query: 220 FTPTLGACSALVNPVRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGLLGDTVLAFEEIG 399
               L AC+ +    +G+QVH L+I +G D  V+  TAL++ YS  G + + +  F  + 
Sbjct: 196 LCSVLKACAFIKAFRQGKQVHGLVIVMGRDL-VVLGTALIDFYSNVGYISEAMKVFSCLS 254

Query: 400 F-KDVVTWNAMLSSFLHHNLPLKALDVFREMREQRVVFS 513
             KD V  N++++  + H    +A  V   MR   V  +
Sbjct: 255 CRKDEVLRNSLIAGCVKHRRYEEAFLVMSTMRPNAVALT 293


>ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 498

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/147 (50%), Positives = 98/147 (66%)
 Frame = +1

Query: 82  FDVMSERXXXXXXXXXXXYTRNGDFQASWDLFHCMHRVRSDLNSYTFTPTLGACSALVNP 261
           FD M  R           + R+G+  A+  +F  +HR  S LNSYT TP L    A+++P
Sbjct: 1   FDEMPHRDLYTLNSLIASHVRSGNAVAALSVFRRIHRAGSHLNSYTLTPVL----AVLDP 56

Query: 262 VRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGLLGDTVLAFEEIGFKDVVTWNAMLSSF 441
           + G+QVH+L IK G D+  +TKTALM+MYSK+G LG +V  FEE+GFKDVVTWN MLSSF
Sbjct: 57  ICGKQVHALAIKTGSDTPTVTKTALMDMYSKYGQLGSSVRVFEEVGFKDVVTWNTMLSSF 116

Query: 442 LHHNLPLKALDVFREMREQRVVFSEFS 522
           + H  P +AL VFREM+++ V  SEF+
Sbjct: 117 VRHGRPEEALAVFREMQKEGVWLSEFT 143



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/94 (29%), Positives = 52/94 (55%)
 Frame = +1

Query: 208 NSYTFTPTLGACSALVNPVRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGLLGDTVLAF 387
           N    T  L ACS   +   G+Q+H + ++ G   +      L++MY+K G + +    F
Sbjct: 236 NVVAVTSALAACSKNSDLWVGKQIHCVAMRFGFTFDTQLCNVLLDMYAKCGKILNARSLF 295

Query: 388 EEIGFKDVVTWNAMLSSFLHHNLPLKALDVFREM 489
           + +  KDVV+W +M+ ++ +H   L+AL +F++M
Sbjct: 296 DRMDKKDVVSWTSMIDAYGNHGHGLEALKLFKKM 329


>ref|XP_002865063.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310898|gb|EFH41322.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 532

 Score =  135 bits (339), Expect = 5e-30
 Identities = 73/151 (48%), Positives = 96/151 (63%)
 Frame = +1

Query: 70  APNLFDVMSERXXXXXXXXXXXYTRNGDFQASWDLFHCMHRVRSDLNSYTFTPTLGACSA 249
           A +LFD + +R           Y R+G+   +  LF  MHR   DL+S+TFTP LGAC+ 
Sbjct: 37  ADHLFDELPQRDLSSLNSQLSSYLRSGNPNGTLALFLEMHRASPDLSSHTFTPVLGACAL 96

Query: 250 LVNPVRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGLLGDTVLAFEEIGFKDVVTWNAM 429
           L  P  GRQVH+LMIK G ++  I+KTAL+NMYSK+G L D+V  FE +  KDVV+WNA+
Sbjct: 97  LSYPETGRQVHALMIKQGAETGTISKTALINMYSKYGHLVDSVRVFESVEEKDVVSWNAL 156

Query: 430 LSSFLHHNLPLKALDVFREMREQRVVFSEFS 522
           LS FL +    +AL VF  M  +RV  SEF+
Sbjct: 157 LSGFLRNGKGKEALGVFAAMCRERVEISEFT 187



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/110 (30%), Positives = 57/110 (51%)
 Frame = +1

Query: 169 DLFHCMHRVRSDLNSYTFTPTLGACSALVNPVRGRQVHSLMIKLGLDSEVITKTALMNMY 348
           + F  M R R ++     +  L  CS   +   G+Q+H + ++ G  S++     LM+MY
Sbjct: 269 EAFLLMSRKRPNVR--VLSSCLAGCSDNSDLWIGKQIHCVALRNGFVSDIKLCNGLMDMY 326

Query: 349 SKFGLLGDTVLAFEEIGFKDVVTWNAMLSSFLHHNLPLKALDVFREMREQ 498
            K G +      F  I  K VV+W +M+ ++  +   +KAL++FREM E+
Sbjct: 327 GKCGQIVQARTLFRAISSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEE 376


>ref|NP_201451.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171135|sp|Q9FJY9.1|PP448_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g66500, mitochondrial; Flags: Precursor
           gi|10177531|dbj|BAB10926.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010838|gb|AED98221.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 532

 Score =  131 bits (330), Expect = 5e-29
 Identities = 74/171 (43%), Positives = 103/171 (60%)
 Frame = +1

Query: 10  TLILSNCIRISKHECHTLQTAPNLFDVMSERXXXXXXXXXXXYTRNGDFQASWDLFHCMH 189
           T ++  C+ I     H    A +LFD + +R           + R+G+   +  LF  +H
Sbjct: 21  TNLVLRCVFIRNFATH----ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIH 76

Query: 190 RVRSDLNSYTFTPTLGACSALVNPVRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGLLG 369
           R   DL+S+TFTP LGACS L  P  GRQVH+LMIK G ++  I+KTAL++MYSK+G L 
Sbjct: 77  RASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLV 136

Query: 370 DTVLAFEEIGFKDVVTWNAMLSSFLHHNLPLKALDVFREMREQRVVFSEFS 522
           D+V  FE +  KD+V+WNA+LS FL +    +AL VF  M  +RV  SEF+
Sbjct: 137 DSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/125 (23%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
 Frame = +1

Query: 79  LFDVMSERXXXXXXXXXXXYTRNGDFQASWDLFHCMHRVRSDLNSYTFTPTLGACSALVN 258
           +F+ + E+           + RNG  + +  +F  M+R R +++ +T +  +  C++L  
Sbjct: 141 VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKI 200

Query: 259 PVRGRQVHSLMIKLGLDSEVITKTALMNMYSKFGLLGDTVLAFEEIG-FKDVVTWNAMLS 435
             +G+QVH++++  G D  V+  TA+++ YS  GL+ + +  +  +    D V  N+++S
Sbjct: 201 LQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLIS 259

Query: 436 SFLHH 450
             + +
Sbjct: 260 GCIRN 264



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/110 (30%), Positives = 57/110 (51%)
 Frame = +1

Query: 169 DLFHCMHRVRSDLNSYTFTPTLGACSALVNPVRGRQVHSLMIKLGLDSEVITKTALMNMY 348
           + F  M R R ++     + +L  CS   +   G+Q+H + ++ G  S+      LM+MY
Sbjct: 269 EAFLLMSRQRPNVR--VLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326

Query: 349 SKFGLLGDTVLAFEEIGFKDVVTWNAMLSSFLHHNLPLKALDVFREMREQ 498
            K G +      F  I  K VV+W +M+ ++  +   +KAL++FREM E+
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEE 376