BLASTX nr result
ID: Angelica22_contig00041328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00041328
(470 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 124 9e-59
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 123 3e-56
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 120 1e-52
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 117 2e-51
emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera] 116 2e-51
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 124 bits (312), Expect(3) = 9e-59
Identities = 59/71 (83%), Positives = 67/71 (94%)
Frame = +3
Query: 3 KMSSIRVVLGLAAKLNLEVE*LDVKTAFLHGNLEEEIYMEQPEGFKVPGKEDLVCRLRKS 182
K SSIRVVLGLAA+L++E+E +DVKTAFLHG+L+EEIYMEQPEGFKV GKED VCRL+KS
Sbjct: 898 KFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKS 957
Query: 183 LYGLKQAPRQW 215
LYGLKQAPRQW
Sbjct: 958 LYGLKQAPRQW 968
Score = 115 bits (289), Expect(3) = 9e-59
Identities = 53/73 (72%), Positives = 70/73 (95%)
Frame = +1
Query: 208 ASGYCVFVKRFSEDDFIILLLYVDDMLIVGHDASKIEKLKEDLSKTFAMKDLGPAKQILG 387
+S +CVFV R+S+DDF+ILLLYVDDMLIVG +AS+I++LK++LSK+F+MKD+GPAKQILG
Sbjct: 985 SSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILG 1044
Query: 388 MQIIRDRKNKKLF 426
M+IIRDR+NKKL+
Sbjct: 1045 MKIIRDRQNKKLW 1057
Score = 32.7 bits (73), Expect(3) = 9e-59
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 411 EQETFWLSQERYINKVLERF 470
+ + WLSQE+YI KVLERF
Sbjct: 1052 QNKKLWLSQEKYIEKVLERF 1071
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 123 bits (309), Expect(3) = 3e-56
Identities = 60/71 (84%), Positives = 65/71 (91%)
Frame = +3
Query: 3 KMSSIRVVLGLAAKLNLEVE*LDVKTAFLHGNLEEEIYMEQPEGFKVPGKEDLVCRLRKS 182
KM+SIR VLGLAA LNLEVE +DVKTAFLHG+LEEEIYMEQP+GF+ GKED VCRLRKS
Sbjct: 901 KMTSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKS 960
Query: 183 LYGLKQAPRQW 215
LYGLKQAPRQW
Sbjct: 961 LYGLKQAPRQW 971
Score = 108 bits (271), Expect(3) = 3e-56
Identities = 53/72 (73%), Positives = 63/72 (87%)
Frame = +1
Query: 211 SGYCVFVKRFSEDDFIILLLYVDDMLIVGHDASKIEKLKEDLSKTFAMKDLGPAKQILGM 390
S +CVF ++FS+DDFIILLLYVDDMLIVG + S+I LKE LSK FAMKDLGPAKQILGM
Sbjct: 989 SDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILGM 1048
Query: 391 QIIRDRKNKKLF 426
+I+RDR+ KKL+
Sbjct: 1049 RIMRDREAKKLW 1060
Score = 32.3 bits (72), Expect(3) = 3e-56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 411 EQETFWLSQERYINKVLERF 470
E + WLSQE+YI KVL+RF
Sbjct: 1055 EAKKLWLSQEKYIEKVLQRF 1074
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 120 bits (300), Expect(3) = 1e-52
Identities = 59/71 (83%), Positives = 65/71 (91%)
Frame = +3
Query: 3 KMSSIRVVLGLAAKLNLEVE*LDVKTAFLHGNLEEEIYMEQPEGFKVPGKEDLVCRLRKS 182
KMSSIR+VL LAA L+LEVE +DVKTAFLHG+LEEEIYM+QP+GF V GKED VCRLRKS
Sbjct: 844 KMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKS 903
Query: 183 LYGLKQAPRQW 215
LYGLKQAPRQW
Sbjct: 904 LYGLKQAPRQW 914
Score = 102 bits (255), Expect(3) = 1e-52
Identities = 49/72 (68%), Positives = 63/72 (87%)
Frame = +1
Query: 211 SGYCVFVKRFSEDDFIILLLYVDDMLIVGHDASKIEKLKEDLSKTFAMKDLGPAKQILGM 390
S +CVFVK+F+ DDFIILLLYVDD+LIVG D S I +LK+ LS++FAMKD+G AKQILG+
Sbjct: 932 SDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGI 991
Query: 391 QIIRDRKNKKLF 426
+I+RDR+ KKL+
Sbjct: 992 RIMRDRQEKKLW 1003
Score = 30.0 bits (66), Expect(3) = 1e-52
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 411 EQETFWLSQERYINKVLERF 470
+++ WLSQE Y+ +VL+RF
Sbjct: 998 QEKKLWLSQENYVKRVLQRF 1017
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 117 bits (293), Expect(3) = 2e-51
Identities = 56/73 (76%), Positives = 65/73 (89%)
Frame = +3
Query: 3 KMSSIRVVLGLAAKLNLEVE*LDVKTAFLHGNLEEEIYMEQPEGFKVPGKEDLVCRLRKS 182
KM+SIR +L LAA L+LEVE LDVKTAFLHG+LEEEIYMEQPEGF+V GK+ +VC+L KS
Sbjct: 900 KMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKS 959
Query: 183 LYGLKQAPRQWIL 221
LYGLKQAPRQW +
Sbjct: 960 LYGLKQAPRQWYM 972
Score = 100 bits (249), Expect(3) = 2e-51
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 220 CVFVKRFSEDDFIILLLYVDDMLIVGHDASKIEKLKEDLSKTFAMKDLGPAKQILGMQII 399
CV+ KRFSE++FIILLLYVDDMLIVG D I KLK DLSK+F MKDLGPA+QILGM+I+
Sbjct: 991 CVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIV 1050
Query: 400 RDRKNKKLF 426
R+R ++KL+
Sbjct: 1051 RERTSRKLW 1059
Score = 30.8 bits (68), Expect(3) = 2e-51
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 426 WLSQERYINKVLERF 470
WLSQE+YI +VLERF
Sbjct: 1059 WLSQEKYIERVLERF 1073
>emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]
Length = 384
Score = 116 bits (290), Expect(3) = 2e-51
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = +1
Query: 211 SGYCVFVKRFSEDDFIILLLYVDDMLIVGHDASKIEKLKEDLSKTFAMKDLGPAKQILGM 390
S +CVF KRFS+DDFIILLLYVDDMLI+ HDASKIEKLK +LSK+FAMKDLG AKQILGM
Sbjct: 156 SDHCVFTKRFSDDDFIILLLYVDDMLIIDHDASKIEKLKRELSKSFAMKDLGYAKQILGM 215
Query: 391 QIIRDRKNKKLF 426
+I DRKN+KL+
Sbjct: 216 KISHDRKNEKLW 227
Score = 99.8 bits (247), Expect(3) = 2e-51
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = +3
Query: 3 KMSSIRVVLGLAAKLNLEVE*LDVKTAFLHGNLEEEIYMEQPEGFKVPGKEDLVCRLRKS 182
KMSSIRVV A+LNLE+E LD KTAFLHG LEEEIYMEQ EGFKV GKE+ V +LRK+
Sbjct: 71 KMSSIRVV---NAQLNLEIEQLDDKTAFLHGVLEEEIYMEQLEGFKVKGKENFVYKLRKN 127
Query: 183 LYGLKQAPRQW 215
LY LKQAPRQW
Sbjct: 128 LYRLKQAPRQW 138
Score = 32.3 bits (72), Expect(3) = 2e-51
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 411 EQETFWLSQERYINKVLERF 470
+ E WLSQE YI K+LERF
Sbjct: 222 KNEKLWLSQEAYIEKILERF 241