BLASTX nr result

ID: Angelica22_contig00041289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041289
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15551.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...   153   2e-35
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]   153   2e-35

>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/116 (67%), Positives = 90/116 (77%)
 Frame = -3

Query: 348 HTFSVGDALHPQRERIYSFLEELDLRMKKEGYVSSTXXXXXXXXXXXXXXXXXXXXXXLA 169
           HTF+VGD++HP+R+RIY+FLEELDL+MKKEGYVSST                      LA
Sbjct: 563 HTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLA 622

Query: 168 VAFGILTIPAGRPIRVIKNLRVCSDCHTAIKYISKIVGRVVILRDSHRFHHFSDGQ 1
           VAFGIL IPAGRPIRVIKNLRVC DCH A+K+ISKIVGR++ILRDSHRFHHF+ GQ
Sbjct: 623 VAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQ 678


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/116 (67%), Positives = 90/116 (77%)
 Frame = -3

Query: 348 HTFSVGDALHPQRERIYSFLEELDLRMKKEGYVSSTXXXXXXXXXXXXXXXXXXXXXXLA 169
           HTF+VGD++HP+R+RIY+FLEELDL+MKKEGYVSST                      LA
Sbjct: 644 HTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLA 703

Query: 168 VAFGILTIPAGRPIRVIKNLRVCSDCHTAIKYISKIVGRVVILRDSHRFHHFSDGQ 1
           VAFGIL IPAGRPIRVIKNLRVC DCH A+K+ISKIVGR++ILRDSHRFHHF+ GQ
Sbjct: 704 VAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQ 759


>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  159 bits (401), Expect = 3e-37
 Identities = 77/115 (66%), Positives = 89/115 (77%)
 Frame = -3

Query: 348 HTFSVGDALHPQRERIYSFLEELDLRMKKEGYVSSTXXXXXXXXXXXXXXXXXXXXXXLA 169
           HTFSVGD  HP+++RIY+FLEELDL+M++EGYVSST                      LA
Sbjct: 641 HTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLA 700

Query: 168 VAFGILTIPAGRPIRVIKNLRVCSDCHTAIKYISKIVGRVVILRDSHRFHHFSDG 4
           VAFGILTIPAGRPIRV+KNLRVC DCH AIK+ISKIVGR++ILRDSHRFHHFS+G
Sbjct: 701 VAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEG 755


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525106|gb|AET05560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/115 (64%), Positives = 88/115 (76%)
 Frame = -3

Query: 348 HTFSVGDALHPQRERIYSFLEELDLRMKKEGYVSSTXXXXXXXXXXXXXXXXXXXXXXLA 169
           HTFSVGD  HP++ERIY++LEELDL+M++EGYVS T                      LA
Sbjct: 644 HTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLA 703

Query: 168 VAFGILTIPAGRPIRVIKNLRVCSDCHTAIKYISKIVGRVVILRDSHRFHHFSDG 4
           VAFGILTIP GRPIRV+KNLRVC DCH+AIK+ISKIVGR++ILRDSHRFHHF++G
Sbjct: 704 VAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEG 758



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/111 (47%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
 Frame = -3

Query: 348  HTFSVGDALHPQRERIYSFLEELDLRMKKEGYVSSTXXXXXXXXXXXXXXXXXXXXXXLA 169
            HTFSVG  L  +RE I  FLEELDL+M++                             LA
Sbjct: 875  HTFSVGLFLSRERENI-GFLEELDLKMRER--------------EEEKERTLKYLSENLA 919

Query: 168  VAFGILTIPAGRPIRVIKN-LRVCSDCHTAIKYISKIVGRVVILRDSHRFH 19
             A GILTIP GRP RV+K  + VC DC +AIK++SKIVGR++ LRDSHRF+
Sbjct: 920  AALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDSHRFN 970


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/115 (64%), Positives = 88/115 (76%)
 Frame = -3

Query: 348 HTFSVGDALHPQRERIYSFLEELDLRMKKEGYVSSTXXXXXXXXXXXXXXXXXXXXXXLA 169
           HTFSVGD  HP++ERIY++LEELDL+M++EGYVS T                      LA
Sbjct: 644 HTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLA 703

Query: 168 VAFGILTIPAGRPIRVIKNLRVCSDCHTAIKYISKIVGRVVILRDSHRFHHFSDG 4
           VAFGILTIP GRPIRV+KNLRVC DCH+AIK+ISKIVGR++ILRDSHRFHHF++G
Sbjct: 704 VAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEG 758


Top