BLASTX nr result

ID: Angelica22_contig00041111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00041111
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28838.3| unnamed protein product [Vitis vinifera]               63   2e-08
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...    63   2e-08
ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    61   1e-07
ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thalia...    60   2e-07
gb|AAC25941.1| hypothetical protein [Arabidopsis thaliana]             60   2e-07

>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = +2

Query: 83  VFDHDTDDISAEVDGFIFLNLECASKLNAWAGPDHWKFRKVSGSE-NVTEETGSP 244
           V + D DD    VD ++FL+L  ASK NAWAGPDHWK+RKV G E +   E GSP
Sbjct: 377 VVEPDMDDRFERVDDYLFLSLGFASKQNAWAGPDHWKYRKVKGPEDDPATEKGSP 431


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = +2

Query: 83  VFDHDTDDISAEVDGFIFLNLECASKLNAWAGPDHWKFRKVSGSE-NVTEETGSP 244
           V + D DD    VD ++FL+L  ASK NAWAGPDHWK+RKV G E +   E GSP
Sbjct: 377 VVEPDMDDRFERVDDYLFLSLGFASKQNAWAGPDHWKYRKVKGPEDDPATEKGSP 431


>ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 685

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = +2

Query: 62  QDKEATNVFDH-DTDDISAEVDGFIFLNLECASKLNAWAGPDHWKFRKVSGSEN 220
           Q+KE  +  D  D DDI   VDG++FL+L   SK NAWAG DHWKF+K  GSE+
Sbjct: 380 QEKEPFHSQDPPDMDDIFENVDGYLFLSLGFRSKKNAWAGTDHWKFQKAKGSES 433


>ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thaliana]
           gi|75217252|sp|Q564K3.1|CND2_ARATH RecName:
           Full=Condensin complex subunit 2; AltName:
           Full=Chromosome-associated protein H; Short=AtCAP-H;
           AltName: Full=Non-SMC condensin I complex subunit H;
           AltName: Full=Protein EMBRYO DEFECTIVE 2795
           gi|62533251|dbj|BAD95575.1| chromosome associate protein
           subunit H [Arabidopsis thaliana]
           gi|330253609|gb|AEC08703.1| condensin complex subunit 2
           [Arabidopsis thaliana]
          Length = 671

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +2

Query: 56  FLQDKEATNVFDHDTDDISAEVDGFIFLNLECASKLNAWAGPDHWKFRKVSGSE 217
           F ++ E  ++ D D+DD    VD ++FL+L  +SK N+WAGPDHWK+RK  G +
Sbjct: 368 FHEEVEPASLQDMDSDDRLENVDDYLFLSLGISSKQNSWAGPDHWKYRKTKGPD 421


>gb|AAC25941.1| hypothetical protein [Arabidopsis thaliana]
          Length = 704

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = +2

Query: 56  FLQDKEATNVFDHDTDDISAEVDGFIFLNLECASKLNAWAGPDHWKFRKVSGSE 217
           F ++ E  ++ D D+DD    VD ++FL+L  +SK N+WAGPDHWK+RK  G +
Sbjct: 398 FHEEVEPASLQDMDSDDRLENVDDYLFLSLGISSKQNSWAGPDHWKYRKTKGPD 451


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