BLASTX nr result
ID: Angelica22_contig00040980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00040980
(375 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containi... 156 2e-36
emb|CBI19955.3| unnamed protein product [Vitis vinifera] 153 1e-35
tpg|DAA39783.1| TPA: hypothetical protein ZEAMMB73_012385 [Zea m... 115 3e-24
ref|XP_002461793.1| hypothetical protein SORBIDRAFT_02g008110 [S... 114 1e-23
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 111 7e-23
>ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 156 bits (394), Expect = 2e-36
Identities = 70/124 (56%), Positives = 94/124 (75%)
Frame = +2
Query: 2 YNQMLCNYIFPNSFTFTFLFKCFDSFGGLECGRLLHCHVIKMGFDSSVFVMNGLLGFYKK 181
Y++M + NSFTFTFL KCF++ LE GR++H ++K+GF SSVFV N LLGFY
Sbjct: 62 YSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYAN 121
Query: 182 CCRDVGVCFKLFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITG 361
C ++G +++F++MPERDV+SWN+MI AYM RGEI+ A+GL + MPER+IVTWNSV+ G
Sbjct: 122 CSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCG 181
Query: 362 TVKA 373
KA
Sbjct: 182 LSKA 185
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +2
Query: 191 DVGVCFKLFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITGTV 367
DV +F QMPE+ VVSW MI Y G+++ A +F MP +++V+WN++I+G V
Sbjct: 218 DVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYV 276
Score = 56.2 bits (134), Expect = 3e-06
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = +2
Query: 212 LFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITG 361
+F+QMP R+ VSWN+MI Y+ G++ A +F MPE+++V+W ++I+G
Sbjct: 194 VFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISG 243
>emb|CBI19955.3| unnamed protein product [Vitis vinifera]
Length = 488
Score = 153 bits (387), Expect = 1e-35
Identities = 68/113 (60%), Positives = 89/113 (78%)
Frame = +2
Query: 35 NSFTFTFLFKCFDSFGGLECGRLLHCHVIKMGFDSSVFVMNGLLGFYKKCCRDVGVCFKL 214
NSFTFTFL KCF++ LE GR++H ++K+GF SSVFV N LLGFY C ++G +++
Sbjct: 9 NSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRV 68
Query: 215 FDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITGTVKA 373
F++MPERDV+SWN+MI AYM RGEI+ A+GL + MPER+IVTWNSV+ G KA
Sbjct: 69 FEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKA 121
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +2
Query: 191 DVGVCFKLFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITGTV 367
DV +F QMPE+ VVSW MI Y G+++ A +F MP +++V+WN++I+G V
Sbjct: 154 DVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYV 212
Score = 56.2 bits (134), Expect = 3e-06
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = +2
Query: 212 LFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITG 361
+F+QMP R+ VSWN+MI Y+ G++ A +F MPE+++V+W ++I+G
Sbjct: 130 VFEQMPLRNEVSWNSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISG 179
>tpg|DAA39783.1| TPA: hypothetical protein ZEAMMB73_012385 [Zea mays]
Length = 590
Score = 115 bits (289), Expect = 3e-24
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 YNQMLCNYIFPNSFTFTFLFKCFDSFGGLECGRLLHCHVIKMGFDSSVFVMNGLLGFYKK 181
Y M ++PN FTFTFL + +S L R +H +++ GF S V V N LL Y K
Sbjct: 103 YAAMRAAGVYPNGFTFTFLLRACESLRRLFLCRCVHGQIVRCGFGSDVVVQNALLNVYYK 162
Query: 182 CCR--DVGVCFKLFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVI 355
C DVG+ ++FD+M RDVVSWN+++G YM G+ A+ LFEAMPER++V+WN+++
Sbjct: 163 CSDPGDVGIARQVFDEMANRDVVSWNSIVGVYMSNGDAAGAMELFEAMPERNVVSWNTIV 222
Query: 356 TGTVKA 373
+A
Sbjct: 223 AAFTRA 228
Score = 60.1 bits (144), Expect = 2e-07
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +2
Query: 191 DVGVCFKLFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITG 361
+V + LFD M +DVVSW M+ AY GE++ A LF+ MP++++V+WN++ITG
Sbjct: 261 NVESAWSLFDIMDRKDVVSWTAMVSAYAKIGELDSARVLFDQMPDKNLVSWNAMITG 317
>ref|XP_002461793.1| hypothetical protein SORBIDRAFT_02g008110 [Sorghum bicolor]
gi|241925170|gb|EER98314.1| hypothetical protein
SORBIDRAFT_02g008110 [Sorghum bicolor]
Length = 601
Score = 114 bits (284), Expect = 1e-23
Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 YNQMLCNYIFPNSFTFTFLFKCFDSFGGLECGRLLHCHVIKMGFDSSVFVMNGLLGFYKK 181
Y M + PN FTFTFL + +S L R +H +++ GF S V V N LL Y K
Sbjct: 100 YTAMRAAGVSPNGFTFTFLLRACESLRRLPLCRCVHGQIVRCGFGSDVVVQNALLNVYYK 159
Query: 182 CCR--DVGVCFKLFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVI 355
C DVGV K+FD M +RDVVSWN+++G YM G+ A+ LFEA+PER++V+WN+++
Sbjct: 160 CGDPGDVGVARKVFDGMADRDVVSWNSIVGVYMSSGDTTGAMELFEAIPERNVVSWNTIV 219
Query: 356 TGTVKA 373
+A
Sbjct: 220 AAFTRA 225
Score = 58.5 bits (140), Expect = 5e-07
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +2
Query: 212 LFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITG 361
LFD M +DVVSW M+ AY G+++ A LF+ MP++++V+WN++ITG
Sbjct: 265 LFDLMDRKDVVSWTAMVSAYAKIGDLDSARVLFDQMPDKNLVSWNAMITG 314
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 111 bits (277), Expect = 7e-23
Identities = 56/124 (45%), Positives = 77/124 (62%)
Frame = +2
Query: 2 YNQMLCNYIFPNSFTFTFLFKCFDSFGGLECGRLLHCHVIKMGFDSSVFVMNGLLGFYKK 181
Y+ ML + + N++TF FL K S LE + +H H+IKMGF S ++ N LL Y K
Sbjct: 106 YHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSK 165
Query: 182 CCRDVGVCFKLFDQMPERDVVSWNTMIGAYMDRGEIELAVGLFEAMPERSIVTWNSVITG 361
D+ LFDQ+ +RD VSWN+MI Y GEIE+A +F MPER+I++W S+I+G
Sbjct: 166 S-GDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISG 224
Query: 362 TVKA 373
V A
Sbjct: 225 CVGA 228