BLASTX nr result

ID: Angelica22_contig00040941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040941
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
ref|XP_002310301.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici...    65   9e-09
ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containin...    65   1e-08
emb|CBI17393.3| unnamed protein product [Vitis vinifera]               65   2e-08

>ref|XP_002327763.1| predicted protein [Populus trichocarpa] gi|222836848|gb|EEE75241.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 14/118 (11%)
 Frame = +3

Query: 204 PNMLKGTPCVNPNYARPCHIPQMQWRCPPKLNFDSNWHVAAGEESTEAVSQR------RD 365
           P   +G+  +NP        P++QW+CPPK    SNWHV AGEES E+ +Q+       +
Sbjct: 61  PPGFEGSHFLNPCKKELSCFPRIQWKCPPKFVVSSNWHVTAGEESQESQAQKLREMRALE 120

Query: 366 TTDPRPSA-PFYPT-------SDNADNKTPVIPLNPIEMEEEASLQNNSSVPFLSTNS 515
              PRPSA P  P        +D  D+ TP+IPL P+E EE   L ++ + P  ++ S
Sbjct: 121 AFYPRPSAVPPSPVVSLDVEDTDYDDSLTPIIPLIPVEEEEATELPSDLTEPLKTSQS 178


>ref|XP_002310301.1| predicted protein [Populus trichocarpa] gi|222853204|gb|EEE90751.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
 Frame = +3

Query: 201 LPNMLKGTPCVNPNYARPCHIPQMQWRCPPKLNFDSNWHVAAGEES-------------T 341
           LP   +GT  +NP       IP++QW+CPP    + NWHV  GEES              
Sbjct: 60  LPPGFEGTHFLNPCIKELSCIPRVQWKCPPNFVVNYNWHVTDGEESQESEAQKLREMRVL 119

Query: 342 EAVSQRRDTTDPRPSAPFYPTSDNADNK-TPVIPLNPIEMEEEASLQNNSSVPFLSTNSI 518
           EAV  R  +  P P+       +N D+  TP+IPL P+E EE A +    + P  +  + 
Sbjct: 120 EAVYPRPSSVPPSPAVSLDVEEENYDDSLTPIIPLIPVEEEEAAEMPPALTEPLKNPTTS 179

Query: 519 KGEKQKEVLIISTPATDNIISAESVKLSDVEKPENSKAP 635
                  VL+ S     +  +  ++     +KPE  + P
Sbjct: 180 LSPALPPVLLSSGILNSSKCNTPALNPPASQKPELGRLP 218


>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551205|gb|EEF52691.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 461

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
 Frame = +3

Query: 198 ILPNMLKGTPCVNPNYARPCHIPQMQWRCPPKLNFDSNWHVAAGEESTEAVSQRR----- 362
           ILP   +G   VN +Y +   IP ++WRCPP+   D  W V AGEES +   Q +     
Sbjct: 68  ILPPGFEGGAPVNQSYVKLSDIPVIKWRCPPRFVLDLTWQVVAGEESKDVEVQNQREMRV 127

Query: 363 -DTTDPRPSA----PFYPTS----DNADNKTPVIPLNPIEMEE 464
            +   PRPSA    P +P         D++ P IP+ PIE E+
Sbjct: 128 LEAVYPRPSAIPPNPAFPAEVEDFRQGDHQVPQIPITPIEDED 170


>ref|XP_003519872.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Glycine max]
          Length = 520

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
 Frame = +3

Query: 159 LQIKVKLQLRSVSILPNML----KGTPCVNPNYARPCHIPQMQWRCPPKLNFDSNWHVAA 326
           LQ K    L S    PN L    + +  +N       +IPQ++W CPP +   S W VAA
Sbjct: 41  LQAKTSSMLHSSINEPNDLPPGFESSHFLNQPKVEFSNIPQIKWECPPVVVVRSQWRVAA 100

Query: 327 GEESTEAVSQ-------------RRDTTDPRPSAPF-YPTSDNADNKTPVIPLNPIEMEE 464
           GEES E  +Q             R     P PS        D  D +TP+IP+ PIE EE
Sbjct: 101 GEESREKENQKLREMRVLEALYPRLSAIPPSPSVSLDVEEEDYDDGRTPLIPIIPIEEEE 160

Query: 465 EASLQNNSSVPFLSTNSIKGEKQKEVLIISTPATDNIISAESVKLSDVEKP 617
              +    +V    + +++ +  ++ +   T  +    +A +V L    +P
Sbjct: 161 STDILPELAVALKPSPNVQSQNSQQYISAKTSISSASNAAHAVSLDPCIRP 211


>emb|CBI17393.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
 Frame = +3

Query: 186 RSVSILPNMLKGTPCVNPNYARPCHIPQMQWRCPPKLNFDSNWHVAAGEESTEAVSQRRD 365
           R  + LP+  K T  VN +  +  HIP+++W+CPPK    SNW VA+GEES EA +Q+  
Sbjct: 54  RDTNGLPHGFKDTR-VNQSKKKVSHIPKIKWKCPPKFVLSSNWLVASGEESQEAEAQK-- 110

Query: 366 TTDPRPSAPFYPTSDNADNKTPVIPLNP-IEMEEEASLQNNSSVPFLSTNSIKGEKQKEV 542
             +       YP       +   IPL+P I ++ E   Q++  +P +   S++ E   + 
Sbjct: 111 LRENHVVEAVYP-------RISAIPLSPSISLDIEECHQDDCDIPLVPITSMEDEGTVDT 163

Query: 543 LI-ISTPATDNIIS 581
           L  ++ P   ++IS
Sbjct: 164 LFDLAAPINSSMIS 177


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