BLASTX nr result
ID: Angelica22_contig00040846
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00040846
(536 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ... 184 9e-45
ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containi... 169 3e-40
ref|XP_002533822.1| pentatricopeptide repeat-containing protein,... 166 2e-39
ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|2... 161 7e-38
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi... 160 9e-38
>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498545|gb|AES79748.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 653
Score = 184 bits (466), Expect = 9e-45
Identities = 91/166 (54%), Positives = 120/166 (72%)
Frame = -1
Query: 536 VCYTMVLDGVIEEGDYAKADELFDEMLVLGVVPDIWTYNVYLRGLFKQKNIDAGIDMLAC 357
VCYT+VL G+++EGDY K DELFDE+LVLG+VPD++TYNVY+ GL KQ N D + ++
Sbjct: 291 VCYTIVLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVS 350
Query: 356 IENVGCKPDVVSYNGILSTLCESGDLKTAKEVANLMRSKGVQHNLRTYEIMLGGMILQGE 177
+E +GCKP+VV+YN +L LC SGDL AK V MR KGV+ NL TY IML G++ +GE
Sbjct: 351 MEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGE 410
Query: 176 IHEACNLLEDMVGKGFVPQSSTFFKLLPALGQTGPGSMELEVFSKI 39
I EAC LLE+M+ K F P+SSTF ++ + Q G S L + +KI
Sbjct: 411 IGEACVLLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNKI 456
Score = 58.9 bits (141), Expect = 5e-07
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = -1
Query: 527 TMVLDGVIEEGDYAKADEL--FDEMLVLGVVPDIWTYNVYLRGLFKQ-KNIDAGIDMLAC 357
++++ + E+ D + L + M LG P + +R L K+ K +DA +++L
Sbjct: 222 SLIISSLCEQNDLTSVEALVVWGNMRKLGFCPGVMDCTNMIRFLVKEGKGMDA-LEILNQ 280
Query: 356 IENVGCKPDVVSYNGILSTLCESGDLKTAKEVANLMRSKGVQHNLRTYEIMLGGMILQGE 177
++ G KPD+V Y +LS + + GD E+ + + G+ ++ TY + + G+ Q
Sbjct: 281 LKEDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVYINGLCKQNN 340
Query: 176 IHEACNLLEDMVGKGFVPQSSTFFKLLPALGQTG 75
EA ++ M G P T+ LL AL +G
Sbjct: 341 FDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSG 374
>ref|XP_004137893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
gi|449483740|ref|XP_004156675.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Cucumis sativus]
Length = 491
Score = 169 bits (427), Expect = 3e-40
Identities = 79/147 (53%), Positives = 113/147 (76%)
Frame = -1
Query: 536 VCYTMVLDGVIEEGDYAKADELFDEMLVLGVVPDIWTYNVYLRGLFKQKNIDAGIDMLAC 357
VCYTMVL+GVI +GDY ADELFDE+L+ G+VPDI+TYNVY+ GL KQ + AG+ M+
Sbjct: 287 VCYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPH 346
Query: 356 IENVGCKPDVVSYNGILSTLCESGDLKTAKEVANLMRSKGVQHNLRTYEIMLGGMILQGE 177
+E +GC+P+V++YN IL +LC++G+L A+++ + M+ KG+ NLRT+ IM+ G+ GE
Sbjct: 347 MEALGCQPNVITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGE 406
Query: 176 IHEACNLLEDMVGKGFVPQSSTFFKLL 96
+ EAC LLE+M+G F PQ STF ++L
Sbjct: 407 VIEACVLLEEMLGSRFPPQISTFSEIL 433
>ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526239|gb|EEF28557.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 373
Score = 166 bits (420), Expect = 2e-39
Identities = 77/168 (45%), Positives = 120/168 (71%)
Frame = -1
Query: 536 VCYTMVLDGVIEEGDYAKADELFDEMLVLGVVPDIWTYNVYLRGLFKQKNIDAGIDMLAC 357
VCYT VL+GVI G Y+KADELFDE+LV G+VPD++TYNVY+ GL KQ N++AGI+M+
Sbjct: 164 VCYTTVLNGVIANGVYSKADELFDELLVFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTS 223
Query: 356 IENVGCKPDVVSYNGILSTLCESGDLKTAKEVANLMRSKGVQHNLRTYEIMLGGMILQGE 177
+E +GCKP++++YN +L LC++G+ A+++ M SKG+ ++TY++M+ G+ G+
Sbjct: 224 MEELGCKPNLITYNILLEDLCKNGEDSRARDLVRDMGSKGIGLGMQTYKVMIHGLTSGGK 283
Query: 176 IHEACNLLEDMVGKGFVPQSSTFFKLLPALGQTGPGSMELEVFSKITD 33
I +AC+LLE+ + KG P+ F +++ L QTG LE+ K+ +
Sbjct: 284 IVKACSLLEEALDKGLCPRGLRFDEVIYGLCQTGSICKALELLEKVVN 331
>ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|222855149|gb|EEE92696.1|
predicted protein [Populus trichocarpa]
Length = 506
Score = 161 bits (407), Expect = 7e-38
Identities = 78/165 (47%), Positives = 110/165 (66%)
Frame = -1
Query: 533 CYTMVLDGVIEEGDYAKADELFDEMLVLGVVPDIWTYNVYLRGLFKQKNIDAGIDMLACI 354
CYTMVL GVIE+ DY KADELFDE+LV G+VPD +TYNVY+ GL KQ N+ AGI M+A +
Sbjct: 293 CYTMVLHGVIEDKDYLKADELFDELLVFGLVPDAYTYNVYINGLCKQNNVQAGIKMVASM 352
Query: 353 ENVGCKPDVVSYNGILSTLCESGDLKTAKEVANLMRSKGVQHNLRTYEIMLGGMILQGEI 174
E +GCKP++++YN ++ LC+ G+L A E+ M KG+ N++TY IM+ G+ G+I
Sbjct: 353 EELGCKPNLITYNMLVKQLCKVGELSKAGELVREMGLKGIGLNMQTYRIMIDGLASNGKI 412
Query: 173 HEACNLLEDMVGKGFVPQSSTFFKLLPALGQTGPGSMELEVFSKI 39
EAC L E+ + KG QS F +++ L L++ K+
Sbjct: 413 VEACGLFEEALDKGLCTQSLMFDEIICGLCHRDLSCKALKLLEKM 457
>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
mitochondrial-like [Vitis vinifera]
Length = 505
Score = 160 bits (406), Expect = 9e-38
Identities = 84/172 (48%), Positives = 115/172 (66%)
Frame = -1
Query: 536 VCYTMVLDGVIEEGDYAKADELFDEMLVLGVVPDIWTYNVYLRGLFKQKNIDAGIDMLAC 357
V YTM+L+GV +GDY KAD+LFDEMLVLGVVPDI YNVY+ L KQ NI+ G+ MLA
Sbjct: 292 VSYTMILNGVTADGDYEKADDLFDEMLVLGVVPDIHAYNVYINSLCKQNNIEEGVRMLAS 351
Query: 356 IENVGCKPDVVSYNGILSTLCESGDLKTAKEVANLMRSKGVQHNLRTYEIMLGGMILQGE 177
+ +GCKPD V+YN +L + + DL +E+A M +GVQ N TY IML G++ +GE
Sbjct: 352 MRELGCKPDYVTYNMLLEGMSKVRDLGGMRELAREMELEGVQWNWETYRIMLDGLVGKGE 411
Query: 176 IHEACNLLEDMVGKGFVPQSSTFFKLLPALGQTGPGSMELEVFSKITDGCVA 21
I E+C+LLE+M+ K F STF +++ L Q G L++ +K+ +A
Sbjct: 412 IDESCSLLEEMLDKYFSCWCSTFDEIICELCQRGLVCKALQLVNKMVRKTIA 463