BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040638
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
emb|CBI27235.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...    94   2e-17
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...    84   2e-14
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...    82   6e-14

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/96 (54%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -1

Query: 289 SSLSPP-LESQKHPPLHNPNSTLNFTKKCSKPTSNSPSPASWIESLRSLTRSNQFQQAIY 113
           SS SPP L++Q  P +  P ++   +K   KPTS S S ASW+++LRS TRSN F++AI 
Sbjct: 19  SSHSPPSLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAIS 78

Query: 112 TYNDMIMAGIAPNNFAFPAVLKAVTGLQDMNVGKQI 5
           TY +M ++G  P+NFAFPAVLKAV+GLQD+  G+QI
Sbjct: 79  TYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114


>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/96 (54%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -1

Query: 289 SSLSPP-LESQKHPPLHNPNSTLNFTKKCSKPTSNSPSPASWIESLRSLTRSNQFQQAIY 113
           SS SPP L++Q  P +  P ++   +K   KPTS S S ASW+++LRS TRSN F++AI 
Sbjct: 19  SSHSPPSLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAIS 78

Query: 112 TYNDMIMAGIAPNNFAFPAVLKAVTGLQDMNVGKQI 5
           TY +M ++G  P+NFAFPAVLKAV+GLQD+  G+QI
Sbjct: 79  TYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/66 (68%), Positives = 56/66 (84%)
 Frame = -1

Query: 202 KPTSNSPSPASWIESLRSLTRSNQFQQAIYTYNDMIMAGIAPNNFAFPAVLKAVTGLQDM 23
           KP S S S ASWIESLR  TRSN F++AI TY DMI++G++P+++AFP VLKAVTGLQD+
Sbjct: 34  KPISQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDL 93

Query: 22  NVGKQI 5
           N+GKQI
Sbjct: 94  NLGKQI 99


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/97 (50%), Positives = 59/97 (60%), Gaps = 7/97 (7%)
 Frame = -1

Query: 274 PLESQKHPPL--HNPNSTLNFTKKC-----SKPTSNSPSPASWIESLRSLTRSNQFQQAI 116
           P   QKHP L    P S  +          SK  S S SP  WI+ LRS  RSN  ++A+
Sbjct: 19  PFSRQKHPYLLRATPTSVTDDVASTVYGAPSKFISQSHSPEWWIDLLRSKVRSNLLREAV 78

Query: 115 YTYNDMIMAGIAPNNFAFPAVLKAVTGLQDMNVGKQI 5
            TY DMI+ GI P+NFAFPA+LKAV  LQDM++GKQI
Sbjct: 79  LTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQI 115


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 14/116 (12%)
 Frame = -1

Query: 310 LSLTQNLSSLSP------PLESQKHPPLHNPNSTLNFTKKCSKPTSNSPS--------PA 173
           L+ T +L S+ P      P    KHP L     T + T+  +   S +PS        P 
Sbjct: 5   LAFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPT-SATEDVASAVSGAPSIFISQSRSPE 63

Query: 172 SWIESLRSLTRSNQFQQAIYTYNDMIMAGIAPNNFAFPAVLKAVTGLQDMNVGKQI 5
            WI+ LRS  RSN  ++A+ TY DMI+ GI P+N+AFPA+LKAV  LQDM +GKQI
Sbjct: 64  WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119