BLASTX nr result

ID: Angelica22_contig00040596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040596
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...   122   4e-26
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
emb|CBI19832.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17

>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/92 (67%), Positives = 65/92 (70%)
 Frame = +3

Query: 3   MKLLGFEPDNFTFTSVLSALALIADRETHCQQLHCVVVKSGTGFVTSVVNALISVYVKCX 182
           MK   F PDNFTFTSVL ALAL+A+ E HCQQLHC VVKSGT FVTSV+NALISVYVKC 
Sbjct: 142 MKRNDFRPDNFTFTSVLGALALVAENERHCQQLHCTVVKSGTWFVTSVLNALISVYVKCA 201

Query: 183 XXXXXXXXXXXXXXXXXFDEMPVRDELSWTTI 278
                            FDEMPVRDELSWTTI
Sbjct: 202 SSPSVISSSLMGAARRLFDEMPVRDELSWTTI 233


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/87 (66%), Positives = 63/87 (72%)
 Frame = +3

Query: 18  FEPDNFTFTSVLSALALIADRETHCQQLHCVVVKSGTGFVTSVVNALISVYVKCXXXXXX 197
           F PDN+TFTSVL ALAL+A++E HCQQLHC VVKSGTGFVTSV+NALIS YVKC      
Sbjct: 143 FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSA 202

Query: 198 XXXXXXXXXXXXFDEMPVRDELSWTTI 278
                       FDEMP RDELSWTTI
Sbjct: 203 QSSSLMAEARKLFDEMPNRDELSWTTI 229


>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/88 (61%), Positives = 61/88 (69%)
 Frame = +3

Query: 15  GFEPDNFTFTSVLSALALIADRETHCQQLHCVVVKSGTGFVTSVVNALISVYVKCXXXXX 194
           GF PDNFTFTSVL ALALI + E  CQQ+HC VVKSG+GFVTSV+NAL+SV+VKC     
Sbjct: 142 GFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPL 201

Query: 195 XXXXXXXXXXXXXFDEMPVRDELSWTTI 278
                        FDEM  RDELSWTT+
Sbjct: 202 VSSSSLMAAARKLFDEMTERDELSWTTM 229


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/88 (61%), Positives = 61/88 (69%)
 Frame = +3

Query: 15  GFEPDNFTFTSVLSALALIADRETHCQQLHCVVVKSGTGFVTSVVNALISVYVKCXXXXX 194
           GF PDNFTFTSVL ALALI + E  CQQ+HC VVKSG+GFVTSV+NAL+SV+VKC     
Sbjct: 144 GFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPL 203

Query: 195 XXXXXXXXXXXXXFDEMPVRDELSWTTI 278
                        FDEM  RDELSWTT+
Sbjct: 204 VSSSSLMAAARKLFDEMTERDELSWTTM 231


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/94 (55%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = +3

Query: 3   MKLLGFEPDNFTFTSVLSALALIADRETHCQQLHCVVVKSGTGFVTSVVNALISVYVKCX 182
           MK LGF PD FTF+SVL AL+LIAD ETHCQQLHC V K G   V SV+NAL+S YV C 
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180

Query: 183 XXXXXXXXXXXXXXXXXFDEMPV--RDELSWTTI 278
                            FDE P   RDE +WTTI
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTI 214


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