BLASTX nr result

ID: Angelica22_contig00040504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040504
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like...    95   5e-18
ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like...    95   5e-18
gb|AAC97989.1| Similar to the end of DNA repair protein gb|X7461...    94   9e-18
ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabid...    94   9e-18
ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like...    94   1e-17

>ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 924

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/56 (76%), Positives = 55/56 (98%)
 Frame = +3

Query: 3    GQFKPIRVVRFIIQDTIEERILELQKKKELMFEGTVGGSADALGKLTENDMKFLFV 170
            GQ+KPIR+VRF+I++TIEERIL+LQ+KKEL+FEGT+GGS+DALGKLTE D++FLFV
Sbjct: 868  GQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSSDALGKLTEADLRFLFV 923


>ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 926

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/56 (76%), Positives = 55/56 (98%)
 Frame = +3

Query: 3    GQFKPIRVVRFIIQDTIEERILELQKKKELMFEGTVGGSADALGKLTENDMKFLFV 170
            GQ+KPIR+VRF+I++TIEERIL+LQ+KKEL+FEGT+GGS+DALGKLTE D++FLFV
Sbjct: 870  GQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSSDALGKLTEADLRFLFV 925


>gb|AAC97989.1| Similar to the end of DNA repair protein gb|X74615 (rad8) gene
           [Arabidopsis thaliana]
          Length = 95

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/55 (80%), Positives = 52/55 (94%)
 Frame = +3

Query: 3   GQFKPIRVVRFIIQDTIEERILELQKKKELMFEGTVGGSADALGKLTENDMKFLF 167
           GQ+KPIRVVRFII++T+EERIL LQKKKEL+FEGTVGGS +A+GKLTE DM+FLF
Sbjct: 39  GQYKPIRVVRFIIENTVEERILRLQKKKELVFEGTVGGSQEAIGKLTEEDMRFLF 93


>ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
           gi|332189671|gb|AEE27792.1| Helicase protein with
           RING/U-box domain [Arabidopsis thaliana]
          Length = 833

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/55 (80%), Positives = 52/55 (94%)
 Frame = +3

Query: 3   GQFKPIRVVRFIIQDTIEERILELQKKKELMFEGTVGGSADALGKLTENDMKFLF 167
           GQ+KPIRVVRFII++T+EERIL LQKKKEL+FEGTVGGS +A+GKLTE DM+FLF
Sbjct: 777 GQYKPIRVVRFIIENTVEERILRLQKKKELVFEGTVGGSQEAIGKLTEEDMRFLF 831


>ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like [Vitis vinifera]
          Length = 989

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/56 (76%), Positives = 54/56 (96%)
 Frame = +3

Query: 3    GQFKPIRVVRFIIQDTIEERILELQKKKELMFEGTVGGSADALGKLTENDMKFLFV 170
            GQ+KPIR+VRF+I+ TIEERIL+LQ+KKEL+FEGTVGGS++ALGKLTE D+KFLF+
Sbjct: 933  GQYKPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFI 988


Top