BLASTX nr result
ID: Angelica22_contig00040379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00040379
(466 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi... 168 4e-40
emb|CBI24389.3| unnamed protein product [Vitis vinifera] 168 4e-40
ref|XP_002531422.1| pentatricopeptide repeat-containing protein,... 168 4e-40
ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-37
ref|XP_003596227.1| Pentatricopeptide repeat-containing protein,... 160 1e-37
>ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 168 bits (426), Expect = 4e-40
Identities = 81/156 (51%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
Frame = +2
Query: 2 SSISKQTTKTRNSVIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGF 181
+S + Q +T +++ ++ ITKHG+NGD+K AES+F+RMP KN ISWTAMLTAY NG
Sbjct: 97 NSSNTQGNRTTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGH 156
Query: 182 IKKARKVFDEMPDRSVESWNAILSGYIR-NRVGVDETLQIFLEMPERNAVSYGVMLNGLV 358
I KARK+F++MP R+ S+NA+++ Y R N + + E ++F EM ERN++SY M+ GL
Sbjct: 157 IAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLA 216
Query: 359 QAGRFDKAEKLYNEVPLSLRDPVSSNVLISGYVRMG 466
+AG D AE+LY E P+ RDPV SN LISGY+++G
Sbjct: 217 RAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVG 252
Score = 64.3 bits (155), Expect = 1e-08
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 41/180 (22%)
Frame = +2
Query: 44 IYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDR 223
+ SN LI+ + K G ++ A +F M +++ISW++M+ Y G I AR++F+ MP+R
Sbjct: 239 VCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPER 298
Query: 224 SVESWNAILSGYIRNRVGVDET-LQIFLEMPERNAVSY--------------------GV 340
+V +W A++ G++ ++G E +FL M + V G+
Sbjct: 299 NVVTWTAMIDGHM--KMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGI 356
Query: 341 MLNGLVQAGRFD--------------------KAEKLYNEVPLSLRDPVSSNVLISGYVR 460
++GLV F+ +A K+++ ++ +D VS N LI+GYV+
Sbjct: 357 QMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFD--MMNRKDVVSWNALIAGYVQ 414
Score = 62.0 bits (149), Expect = 5e-08
Identities = 30/140 (21%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Frame = +2
Query: 41 VIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPD 220
V N +I + + + A +F+ M K+++SW A++ Y N +++ +F++
Sbjct: 371 VFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQ 430
Query: 221 RSVESWNAILSGYIRNRVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFDKA------ 382
+ V SW +++G+ N+ + +++++F MP+++ +++ +++G V G +++A
Sbjct: 431 KDVISWTTMITGF-SNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIE 489
Query: 383 --EKLYNEVPLSLRDPVSSN 436
K+ PL+L +S++
Sbjct: 490 MLRKVVRPNPLTLSSVLSAS 509
Score = 58.9 bits (141), Expect = 4e-07
Identities = 28/93 (30%), Positives = 54/93 (58%)
Frame = +2
Query: 32 RNSVIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDE 211
R V+ N LI + +N +++ +F + K++ISWT M+T ++ G + K+ ++F
Sbjct: 399 RKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRM 458
Query: 212 MPDRSVESWNAILSGYIRNRVGVDETLQIFLEM 310
MP + +W A++SG++ N +E + F+EM
Sbjct: 459 MPKQDDIAWTAVISGFVGNG-EYEEAIYWFIEM 490
>emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 168 bits (426), Expect = 4e-40
Identities = 81/156 (51%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
Frame = +2
Query: 2 SSISKQTTKTRNSVIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGF 181
+S + Q +T +++ ++ ITKHG+NGD+K AES+F+RMP KN ISWTAMLTAY NG
Sbjct: 18 NSSNTQGNRTTKFLVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGH 77
Query: 182 IKKARKVFDEMPDRSVESWNAILSGYIR-NRVGVDETLQIFLEMPERNAVSYGVMLNGLV 358
I KARK+F++MP R+ S+NA+++ Y R N + + E ++F EM ERN++SY M+ GL
Sbjct: 78 IAKARKMFEKMPQRTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITGLA 137
Query: 359 QAGRFDKAEKLYNEVPLSLRDPVSSNVLISGYVRMG 466
+AG D AE+LY E P+ RDPV SN LISGY+++G
Sbjct: 138 RAGMVDNAEELYLETPVEWRDPVCSNALISGYLKVG 173
Score = 64.3 bits (155), Expect = 1e-08
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 41/180 (22%)
Frame = +2
Query: 44 IYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDR 223
+ SN LI+ + K G ++ A +F M +++ISW++M+ Y G I AR++F+ MP+R
Sbjct: 160 VCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPER 219
Query: 224 SVESWNAILSGYIRNRVGVDET-LQIFLEMPERNAVSY--------------------GV 340
+V +W A++ G++ ++G E +FL M + V G+
Sbjct: 220 NVVTWTAMIDGHM--KMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKEGI 277
Query: 341 MLNGLVQAGRFD--------------------KAEKLYNEVPLSLRDPVSSNVLISGYVR 460
++GLV F+ +A K+++ ++ +D VS N LI+GYV+
Sbjct: 278 QMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFD--MMNRKDVVSWNALIAGYVQ 335
Score = 62.0 bits (149), Expect = 5e-08
Identities = 30/140 (21%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Frame = +2
Query: 41 VIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPD 220
V N +I + + + A +F+ M K+++SW A++ Y N +++ +F++
Sbjct: 292 VFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQ 351
Query: 221 RSVESWNAILSGYIRNRVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFDKA------ 382
+ V SW +++G+ N+ + +++++F MP+++ +++ +++G V G +++A
Sbjct: 352 KDVISWTTMITGF-SNKGKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIE 410
Query: 383 --EKLYNEVPLSLRDPVSSN 436
K+ PL+L +S++
Sbjct: 411 MLRKVVRPNPLTLSSVLSAS 430
Score = 58.9 bits (141), Expect = 4e-07
Identities = 28/93 (30%), Positives = 54/93 (58%)
Frame = +2
Query: 32 RNSVIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDE 211
R V+ N LI + +N +++ +F + K++ISWT M+T ++ G + K+ ++F
Sbjct: 320 RKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRM 379
Query: 212 MPDRSVESWNAILSGYIRNRVGVDETLQIFLEM 310
MP + +W A++SG++ N +E + F+EM
Sbjct: 380 MPKQDDIAWTAVISGFVGNG-EYEEAIYWFIEM 411
>ref|XP_002531422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528972|gb|EEF30964.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 619
Score = 168 bits (426), Expect = 4e-40
Identities = 77/136 (56%), Positives = 105/136 (77%)
Frame = +2
Query: 59 LITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDRSVESW 238
+I KHG NG+I+ +ES+FNRMP KN+I+ T+MLTAYA NG I KA+K+FDEMP+R+ ++
Sbjct: 1 MINKHGNNGNIEESESIFNRMPHKNVITHTSMLTAYAKNGQIAKAKKLFDEMPERTTATY 60
Query: 239 NAILSGYIRNRVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFDKAEKLYNEVPLSLR 418
NA+++ YIRN VDE +F M ERNAVSYG M+ G ++AG F+KAE LY E+P R
Sbjct: 61 NAMITAYIRNSCMVDEAFSLFSRMSERNAVSYGAMITGFLKAGMFEKAENLYREIPAKWR 120
Query: 419 DPVSSNVLISGYVRMG 466
+PV SN +ISGY+++G
Sbjct: 121 EPVCSNAMISGYLKVG 136
Score = 69.3 bits (168), Expect = 3e-10
Identities = 30/114 (26%), Positives = 71/114 (62%)
Frame = +2
Query: 41 VIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPD 220
+ N++I + + G + A+ +F M K+++SW ++++ Y + I++A K+F+++P
Sbjct: 253 IFLGNSIIAMYCEFGCMDEAKRMFQMMNNKDVVSWNSLISGYIQHDEIEEAYKLFEKIPG 312
Query: 221 RSVESWNAILSGYIRNRVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFDKA 382
+ V SW +++G+ + V + +Q+F MPE++ V++ +++G V G +++A
Sbjct: 313 KDVVSWTTMITGF-SAKGNVQKGIQLFKIMPEKDDVAWTAVISGFVSNGEYEEA 365
Score = 69.3 bits (168), Expect = 3e-10
Identities = 41/153 (26%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Frame = +2
Query: 41 VIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPD 220
V+ N+LI+ + ++ +I+ A +F ++P K+++SWT M+T ++ G ++K ++F MP+
Sbjct: 284 VVSWNSLISGYIQHDEIEEAYKLFEKIPGKDVVSWTTMITGFSAKGNVQKGIQLFKIMPE 343
Query: 221 RSVESWNAILSGYIRNRVGVDETLQIFLEMPER----NAVSYGVMLNGLVQAGRFDK--- 379
+ +W A++SG++ N +E F+EM ++ N++++ ML ++
Sbjct: 344 KDDVAWTAVISGFVSNG-EYEEAFLWFIEMLKKAVKPNSLTFSSMLTASASLATLNQGLQ 402
Query: 380 ----AEKLYNEVPLSLRDPVSSNVLISGYVRMG 466
EK+ + LS+R N L+S Y + G
Sbjct: 403 IHAHVEKMDVQFDLSIR-----NSLVSMYSKCG 430
Score = 61.2 bits (147), Expect = 8e-08
Identities = 38/124 (30%), Positives = 69/124 (55%), Gaps = 4/124 (3%)
Frame = +2
Query: 44 IYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDR 223
+ SN +I+ + K G ++ A VF K+++SW++M+ Y G I +AR++F+ MP R
Sbjct: 123 VCSNAMISGYLKVGRLEEAIKVFEGTVEKDVVSWSSMVDGYCKKGRIFEARELFNMMPVR 182
Query: 224 SVESWNAILSGYIRNRVGVDET-LQIFLEMP---ERNAVSYGVMLNGLVQAGRFDKAEKL 391
+V +W +++ GY+ VG E +FL M E N ++ +M GR+ +A ++
Sbjct: 183 NVVTWTSMIDGYM--NVGFFENGFSLFLSMRRVIEVNPLTLTIMFEACRHFGRYREAMQV 240
Query: 392 YNEV 403
+ V
Sbjct: 241 HGLV 244
Score = 60.5 bits (145), Expect = 1e-07
Identities = 32/112 (28%), Positives = 65/112 (58%)
Frame = +2
Query: 131 NIISWTAMLTAYAGNGFIKKARKVFDEMPDRSVESWNAILSGYIRNRVGVDETLQIFLEM 310
+I +++ Y G + +A+++F M ++ V SWN+++SGYI++ ++E ++F ++
Sbjct: 252 DIFLGNSIIAMYCEFGCMDEAKRMFQMMNNKDVVSWNSLISGYIQHD-EIEEAYKLFEKI 310
Query: 311 PERNAVSYGVMLNGLVQAGRFDKAEKLYNEVPLSLRDPVSSNVLISGYVRMG 466
P ++ VS+ M+ G G K +L+ +P +D V+ +ISG+V G
Sbjct: 311 PGKDVVSWTTMITGFSAKGNVQKGIQLFKIMP--EKDDVAWTAVISGFVSNG 360
>ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 160 bits (405), Expect = 1e-37
Identities = 76/142 (53%), Positives = 102/142 (71%)
Frame = +2
Query: 41 VIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPD 220
+I NT I ++G+NG++K AES+F++MP KN SWTAMLTA+A NG I+ AR++FDEMP
Sbjct: 41 LIQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQ 100
Query: 221 RSVESWNAILSGYIRNRVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFDKAEKLYNE 400
R+ S NA++S YIRN V + ++F + ERN VSY M+ G V+AG+F AEKLY E
Sbjct: 101 RTTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRE 160
Query: 401 VPLSLRDPVSSNVLISGYVRMG 466
P RDP SN LI+GY++MG
Sbjct: 161 TPYEFRDPACSNALINGYLKMG 182
Score = 71.2 bits (173), Expect = 8e-11
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Frame = +2
Query: 50 SNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDRSV 229
SN LI + K G++ A +F M ++++SW+AM+ +G + AR +FD MPDR+V
Sbjct: 171 SNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDRNV 230
Query: 230 ESWNAILSGYIRNRVGVDETLQIFLEMP-----ERNAVSYGVMLNGLVQAGRFDKAEKLY 394
SW+A++ GY+ E +F++M E N+ + +M GR + +++
Sbjct: 231 VSWSAMIDGYMGEGF-FQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIH 289
Query: 395 NEVP-LSLR-DPVSSNVLISGYVRMG 466
V L D V SN +I+ Y +G
Sbjct: 290 GLVSRLGFEFDNVLSNSVITMYSMLG 315
Score = 66.2 bits (160), Expect = 3e-09
Identities = 28/82 (34%), Positives = 54/82 (65%)
Frame = +2
Query: 23 TKTRNSVIYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKV 202
T + ++ N+LI+ + N ++++A VF RMP K++ISWTAM+ ++ +G ++ A ++
Sbjct: 326 TVSDKDIVTWNSLISGYIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIEL 385
Query: 203 FDEMPDRSVESWNAILSGYIRN 268
F+ +P + W AI+SG++ N
Sbjct: 386 FNMLPAKDDFVWTAIISGFVNN 407
Score = 64.7 bits (156), Expect = 8e-09
Identities = 35/109 (32%), Positives = 65/109 (59%)
Frame = +2
Query: 131 NIISWTAMLTAYAGNGFIKKARKVFDEMPDRSVESWNAILSGYIRNRVGVDETLQIFLEM 310
N++S +++T Y+ G A KVF + D+ + +WN+++SGYI N V+ ++F M
Sbjct: 301 NVLS-NSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNE-VEAAYRVFGRM 358
Query: 311 PERNAVSYGVMLNGLVQAGRFDKAEKLYNEVPLSLRDPVSSNVLISGYV 457
P ++ +S+ M+ G ++GR + A +L+N +P +D +ISG+V
Sbjct: 359 PVKDVISWTAMIAGFSKSGRVENAIELFNMLP--AKDDFVWTAIISGFV 405
Score = 63.9 bits (154), Expect = 1e-08
Identities = 30/117 (25%), Positives = 67/117 (57%)
Frame = +2
Query: 44 IYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDR 223
+ SN++IT + G A+ VF + K+I++W ++++ Y N ++ A +VF MP +
Sbjct: 302 VLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVFGRMPVK 361
Query: 224 SVESWNAILSGYIRNRVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFDKAEKLY 394
V SW A+++G+ ++ V+ +++F +P ++ + +++G V +++A Y
Sbjct: 362 DVISWTAMIAGFSKSG-RVENAIELFNMLPAKDDFVWTAIISGFVNNNEYEEALHWY 417
>ref|XP_003596227.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula] gi|355485275|gb|AES66478.1|
Pentatricopeptide repeat-containing protein, partial
[Medicago truncatula]
Length = 402
Score = 160 bits (404), Expect = 1e-37
Identities = 74/138 (53%), Positives = 103/138 (74%)
Frame = +2
Query: 53 NTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDRSVE 232
N I+++G+NG++ +AE++FNRM KNI++WTAMLT YA NG I ARK+FDEMP+R+
Sbjct: 34 NVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTA 93
Query: 233 SWNAILSGYIRNRVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFDKAEKLYNEVPLS 412
++NA++SGYIRN V + ++F +RN VSY M+ GLV+A +FD AEKLY E P
Sbjct: 94 TYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPHE 153
Query: 413 LRDPVSSNVLISGYVRMG 466
RDPV SN LI+GY+++G
Sbjct: 154 FRDPVCSNALINGYLKIG 171
Score = 63.5 bits (153), Expect = 2e-08
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Frame = +2
Query: 44 IYSNTLITKHGKNGDIKSAESVFNRMPC--KNIISWTAMLTAYAGNGFIKKARKVFDEMP 217
+ SN LI + K G++ A VF + ++++SW+A++ +G I AR +FD MP
Sbjct: 158 VCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMP 217
Query: 218 DRSVESWNAILSGYIRNRVGVDETLQIFLEM-----PERNAVSYGVMLNGLVQAGRFDKA 382
+R+V SW+A++ GY+ + + +FL+M E N+ + +M+ G GR +
Sbjct: 218 ERNVVSWSAMIDGYMEKGL-FENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEG 276
Query: 383 EKLYNEVP-LSLR-DPVSSNVLISGYVRMG 466
+++ V L V SN +I+ Y G
Sbjct: 277 IQIHGLVSRLGFEFGSVLSNTIITMYSLFG 306
Score = 63.2 bits (152), Expect = 2e-08
Identities = 30/112 (26%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +2
Query: 44 IYSNTLITKHGKNGDIKSAESVFNRMPCKNIISWTAMLTAYAGNGFIKKARKVFDEMPDR 223
+ SNT+IT + G A+ VF+ M K++++W ++++ Y N + A +VF+ MP++
Sbjct: 293 VLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEK 352
Query: 224 SVESWNAILSGYIRN-RVGVDETLQIFLEMPERNAVSYGVMLNGLVQAGRFD 376
+ SW A++ G+ + R+G + +++F + E++ + V+++G V ++
Sbjct: 353 DLISWTAMIRGFATDGRIG--KAVELFDTLKEKDDFVWTVLISGFVSNEEYE 402