BLASTX nr result

ID: Angelica22_contig00040351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040351
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    60   2e-07
emb|CAN79175.1| hypothetical protein VITISV_001884 [Vitis vinifera]    59   5e-07
emb|CAN64452.1| hypothetical protein VITISV_009528 [Vitis vinifera]    57   2e-06
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    56   3e-06
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia...    56   3e-06

>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
 Frame = +1

Query: 4   QFEQLLKMVPTMTSSHSD--------LEELDSPFSGMVVFYNTVVQKISQEWIVDSGAID 159
           Q  QLL ++   +SS S         L++  S F+G++    +        WI+DSGA  
Sbjct: 323 QHNQLLALLSLHSSSGSSTSFGDSNPLQQSISNFTGILSLSPSSSTLNPSIWILDSGATH 382

Query: 160 HMTSNLSLLSNVKSASSHNTIKLPSGATTIISHIGDIHLKNGILLQDVLYVP 315
           H+ +N S+  ++ S SS NT+ LP+G    I+ IG IHL   ++L+ VLY+P
Sbjct: 383 HVCTNSSMFHSIHSFSS-NTVTLPTGTKIPITGIGTIHLSPHLVLEHVLYIP 433


>emb|CAN79175.1| hypothetical protein VITISV_001884 [Vitis vinifera]
          Length = 1487

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/94 (31%), Positives = 50/94 (53%)
 Frame = +1

Query: 34  TMTSSHSDLEELDSPFSGMVVFYNTVVQKISQEWIVDSGAIDHMTSNLSLLSNVKSASSH 213
           +  SS  D ++ D P         T  +   + WIVD+GA DHMT + ++L N K ++ H
Sbjct: 250 SFNSSGGDRQKRDRPCGSTTGVAFTANRGGMRPWIVDTGASDHMTGDAAILQNYKPSNGH 309

Query: 214 NTIKLPSGATTIISHIGDIHLKNGILLQDVLYVP 315
           +++ +  G+ + I+  G I L   + L  VL+VP
Sbjct: 310 SSVHIADGSKSKIAGTGSIKLTKDLYLDSVLHVP 343


>emb|CAN64452.1| hypothetical protein VITISV_009528 [Vitis vinifera]
          Length = 2220

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/61 (40%), Positives = 39/61 (63%)
 Frame = +1

Query: 133  WIVDSGAIDHMTSNLSLLSNVKSASSHNTIKLPSGATTIISHIGDIHLKNGILLQDVLYV 312
            WIVD+GA DHMT + ++L N K  + H+++ +  G+ + I+ IG I L   + L  VL+V
Sbjct: 1135 WIVDTGASDHMTGDAAILQNYKPXNGHSSVHIVDGSKSKIAGIGSIKLTKDLFLDSVLHV 1194

Query: 313  P 315
            P
Sbjct: 1195 P 1195


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = +1

Query: 133 WIVDSGAIDHMTSNLSLLSNVKSASSHNTIKLPSGATTIISHIGDIHLKNGILLQDVLYV 312
           WI+DSGA DH+TS+  LL + K+     TI LP+G    I  IG +H+   I L DVL V
Sbjct: 411 WIIDSGATDHVTSSAELL-DPKNLPKTTTISLPNGGQAHIESIGSLHVTPHIKLDDVLKV 469

Query: 313 PQ 318
           PQ
Sbjct: 470 PQ 471


>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268497|emb|CAB78748.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1433

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
 Frame = +1

Query: 97  FYNTVVQKISQE-------WIVDSGAIDHMTSNLSLLSNVKSASSHNTIKLPSGATTIIS 255
           +Y+ ++  +SQE       W++DSGA  H+T N  L  N +S  +   ++LP+  T  I+
Sbjct: 413 YYDMLISSVSQEPAVSPRGWVIDSGATHHVTHNRDLYLNFRSLEN-TFVRLPNDCTVKIA 471

Query: 256 HIGDIHLKNGILLQDVLYVPQ 318
            IG I L + I L +VLY+P+
Sbjct: 472 GIGFIQLSDAISLHNVLYIPE 492


Top