BLASTX nr result

ID: Angelica22_contig00040319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040319
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269537.1| PREDICTED: pollen-specific protein SF3 [Viti...   114   1e-23
gb|ACB05475.1| LIM domain protein 2b [Nicotiana tabacum]              110   1e-22
ref|XP_002511828.1| Pollen-specific protein SF3, putative [Ricin...   107   8e-22
ref|XP_002320783.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
gb|ABK58466.1| LIM domain protein PLIM2a [Populus tremula x Popu...   105   3e-21

>ref|XP_002269537.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|147796476|emb|CAN74803.1| hypothetical protein
           VITISV_006290 [Vitis vinifera]
          Length = 220

 Score =  114 bits (284), Expect = 1e-23
 Identities = 48/60 (80%), Positives = 57/60 (95%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           ++++TLE E++HKSCFKCAHGGCPLTHSSY++LNG+LYCK HFSQLFMEKG YSHVLEAA
Sbjct: 117 LEKVTLEGESYHKSCFKCAHGGCPLTHSSYAALNGVLYCKHHFSQLFMEKGNYSHVLEAA 176



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 27/54 (50%), Positives = 39/54 (72%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYS 278
           V  ++ +  ++HK+CFKC+H    L  S+YSS++G+LYCKPHF QLF E G +S
Sbjct: 20  VDLLSADGASYHKTCFKCSHCKGTLVMSNYSSMDGVLYCKPHFEQLFKESGNFS 73


>gb|ACB05475.1| LIM domain protein 2b [Nicotiana tabacum]
          Length = 216

 Score =  110 bits (275), Expect = 1e-22
 Identities = 45/60 (75%), Positives = 57/60 (95%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           ++++T+E E+FHKSCFKCAHGGCPLTH++Y+SL+G+LYCK HF+QLFMEKGTY HVLEAA
Sbjct: 116 LEKVTMEGESFHKSCFKCAHGGCPLTHATYASLDGVLYCKHHFAQLFMEKGTYQHVLEAA 175



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYS 278
           V  +T +   +HKSCFKC+H    L  S+YSS++G+LYCKPHF QLF E G +S
Sbjct: 20  VDLLTADGITYHKSCFKCSHCKGTLVMSNYSSMDGVLYCKPHFEQLFKECGNFS 73


>ref|XP_002511828.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223549008|gb|EEF50497.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 210

 Score =  107 bits (268), Expect = 8e-22
 Identities = 43/60 (71%), Positives = 57/60 (95%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           ++++T+E E FHKSCF+CAHGGCPLTHSSY++L+G+LYCK HF+QLFMEKG+Y+HVL+AA
Sbjct: 116 LEKVTMEGECFHKSCFRCAHGGCPLTHSSYAALDGVLYCKHHFAQLFMEKGSYTHVLQAA 175



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           V  ++LE   +HKSCFKC+H    L  S+YSS++G+LYCK HF QLF E G +S   +A 
Sbjct: 20  VDMLSLEGVPYHKSCFKCSHCKGTLVMSNYSSMDGVLYCKTHFEQLFKESGNFSKNFQAG 79

Query: 259 K 257
           K
Sbjct: 80  K 80


>ref|XP_002320783.1| predicted protein [Populus trichocarpa] gi|222861556|gb|EEE99098.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  105 bits (263), Expect = 3e-21
 Identities = 42/60 (70%), Positives = 56/60 (93%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           ++++T+E E +HK+CF+CAHGGCPLTHSSY++L+G+LYCK HF+QLFMEKGTYSHVL +A
Sbjct: 115 LEKVTMEGECYHKTCFRCAHGGCPLTHSSYAALDGVLYCKVHFAQLFMEKGTYSHVLASA 174



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           V  ++LE   +HKSCFKC+H    L  S+YSS++G+LYCK HF QLF E G +S   +  
Sbjct: 20  VDMMSLEGVPYHKSCFKCSHCKGTLVMSNYSSMDGVLYCKTHFEQLFKEGGDFSKNFQKG 79

Query: 259 KIRST 245
           K   T
Sbjct: 80  KPERT 84


>gb|ABK58466.1| LIM domain protein PLIM2a [Populus tremula x Populus alba]
          Length = 206

 Score =  105 bits (263), Expect = 3e-21
 Identities = 42/60 (70%), Positives = 56/60 (93%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           ++++T+E E +HK+CF+CAHGGCPLTHSSY++L+G+LYCK HF+QLFMEKGTYSHVL +A
Sbjct: 115 LEKVTMEGECYHKTCFRCAHGGCPLTHSSYAALDGVLYCKVHFAQLFMEKGTYSHVLASA 174



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 439 VKQITLEDEAFHKSCFKCAHGGCPLTHSSYSSLNGILYCKPHFSQLFMEKGTYSHVLEAA 260
           V  ++LE   +HKSCFKC+H    L  S+YSS++G+LYCK HF QLF E G +S   +  
Sbjct: 20  VDMMSLEGVPYHKSCFKCSHCKGTLVMSNYSSMDGVLYCKTHFEQLFKEGGDFSRNFQKG 79

Query: 259 KIRST 245
           K   T
Sbjct: 80  KPERT 84


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