BLASTX nr result
ID: Angelica22_contig00040165
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00040165
(277 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2... 149 3e-34
ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi... 147 9e-34
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi... 147 9e-34
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,... 146 2e-33
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi... 144 6e-33
>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
predicted protein [Populus trichocarpa]
Length = 427
Score = 149 bits (375), Expect = 3e-34
Identities = 69/92 (75%), Positives = 84/92 (91%)
Frame = -2
Query: 276 ERNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDR 97
ERNVVSWSTM+SGY KAGD+EMARMLFD+MPVKNLVSWTII+SGYA KG K+AI +++
Sbjct: 71 ERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQ 130
Query: 96 MEGAFLRPDDGTIISVLSACADSGLLGLGERV 1
ME A L+PDDGT+IS+L++CA+SGLLGLG+RV
Sbjct: 131 MEEAGLKPDDGTVISILASCAESGLLGLGKRV 162
Score = 63.2 bits (152), Expect = 2e-08
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = -2
Query: 276 ERNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDR 97
ER+VVSW++MI G K G++ A LFD+MP+K+ VSW I+ GY + G + +A L++
Sbjct: 9 ERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFES 68
Query: 96 M 94
M
Sbjct: 69 M 69
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = -2
Query: 255 STMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDRMEGAFLR 76
+ ++ Y+K G ++ A +F+ M K+LVSW ++ G A G ++A++L+ M R
Sbjct: 179 NALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFR 238
Query: 75 PDDGTIISVLSACADSGLLGLGER 4
PD T+++VL AC +G + G R
Sbjct: 239 PDKVTLVAVLCACVHAGFVDEGIR 262
>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 561
Score = 147 bits (371), Expect = 9e-34
Identities = 68/92 (73%), Positives = 84/92 (91%)
Frame = -2
Query: 276 ERNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDR 97
ERNVVSWSTM+ GY KAGD+EMARMLFDKMPVKNLVSWTII+SG+AEKG +EAI L+D+
Sbjct: 272 ERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQ 331
Query: 96 MEGAFLRPDDGTIISVLSACADSGLLGLGERV 1
ME A L+ D+GT++S+L+ACA+SGLLGLGE++
Sbjct: 332 MEKACLKLDNGTVMSILAACAESGLLGLGEKI 363
Score = 63.5 bits (153), Expect = 2e-08
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = -2
Query: 273 RNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDRM 94
R+VVSW++MISG +K G E AR +FD+MP K+ +SW ++ GY + G + +A +L+D M
Sbjct: 211 RDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEM 270
>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 147 bits (371), Expect = 9e-34
Identities = 68/92 (73%), Positives = 84/92 (91%)
Frame = -2
Query: 276 ERNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDR 97
ERNVVSWSTM+ GY KAGD+EMARMLFDKMPVKNLVSWTII+SG+AEKG +EAI L+D+
Sbjct: 246 ERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQ 305
Query: 96 MEGAFLRPDDGTIISVLSACADSGLLGLGERV 1
ME A L+ D+GT++S+L+ACA+SGLLGLGE++
Sbjct: 306 MEKACLKLDNGTVMSILAACAESGLLGLGEKI 337
Score = 63.5 bits (153), Expect = 2e-08
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = -2
Query: 273 RNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDRM 94
R+VVSW++MISG +K G E AR +FD+MP K+ +SW ++ GY + G + +A +L+D M
Sbjct: 185 RDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEM 244
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = -2
Query: 255 STMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDRMEGAFLR 76
+ ++ Y+K G + +A +F+ + K++VSW ++ G A G +A+EL+ RM+
Sbjct: 354 NALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFS 413
Query: 75 PDDGTIISVLSACADSGLLGLGER 4
P+ T+I VL AC +GL+ G R
Sbjct: 414 PNKVTMIGVLCACTHAGLIDDGIR 437
>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 604
Score = 146 bits (368), Expect = 2e-33
Identities = 69/92 (75%), Positives = 82/92 (89%)
Frame = -2
Query: 276 ERNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDR 97
ERNVVSWSTM+SGY K GD+EMARMLFDKMP KNLV+WTIIISG+AEKG KEA LY++
Sbjct: 248 ERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQ 307
Query: 96 MEGAFLRPDDGTIISVLSACADSGLLGLGERV 1
ME A L+PDDGT+IS+L+ACA+SGLL LG++V
Sbjct: 308 MEAAGLKPDDGTLISILAACAESGLLVLGKKV 339
Score = 62.4 bits (150), Expect = 4e-08
Identities = 26/82 (31%), Positives = 52/82 (63%)
Frame = -2
Query: 255 STMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDRMEGAFLR 76
+ ++ Y+K G ++ A +F++M +++LVSW ++ G A G ++AI+L+ +M+ +
Sbjct: 356 NALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFK 415
Query: 75 PDDGTIISVLSACADSGLLGLG 10
PD T+I++L AC +G + G
Sbjct: 416 PDKVTLIAILCACTHAGFVDQG 437
>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 144 bits (364), Expect = 6e-33
Identities = 70/91 (76%), Positives = 82/91 (90%)
Frame = -2
Query: 273 RNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDRM 94
RNVVSWSTM+ GYSKAGD++MAR+LFDKMPVKNLV WTI+ISGYAEKG K+AI LY++M
Sbjct: 243 RNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQM 302
Query: 93 EGAFLRPDDGTIISVLSACADSGLLGLGERV 1
E A L+ DDGT+IS+LSACA SGLLGLG+RV
Sbjct: 303 EEAGLKFDDGTVISILSACAVSGLLGLGKRV 333
Score = 65.1 bits (157), Expect = 6e-09
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = -2
Query: 276 ERNVVSWSTMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDR 97
ER+ VSW++MI G K G++ AR LFD+MP ++ VSW I+ GY + G + A EL+++
Sbjct: 180 ERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEK 239
Query: 96 M 94
M
Sbjct: 240 M 240
Score = 61.6 bits (148), Expect = 6e-08
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = -2
Query: 255 STMISGYSKAGDIEMARMLFDKMPVKNLVSWTIIISGYAEKGFVKEAIELYDRMEGAFLR 76
+ +I Y+K G +E A +F M K++VSW II G A G ++A++L+ RM+G
Sbjct: 350 NALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFV 409
Query: 75 PDDGTIISVLSACADSGLLGLG 10
PD T + VL AC +G + G
Sbjct: 410 PDKVTFVGVLCACTHAGFVDEG 431