BLASTX nr result

ID: Angelica22_contig00040130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040130
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    86   3e-15
gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]              80   2e-13
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    79   5e-13
emb|CAB86676.1| putative protein [Arabidopsis thaliana]                78   8e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    77   1e-12

>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
 Frame = -1

Query: 474 AWTNAVWFPLAIPKCSFTLWLALKNRLLTKTRTQQFEMNTDTKCVVCHNADETVEHIFCS 295
           AW   VWF  AIPK +F +WLA+ NRL T  R   + M  D  C++C+ A E+ +H+F S
Sbjct: 304 AWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFS 363

Query: 294 CPFVTIIAKHSPFDLVG-----KWTSYLNGNFTSVGDNYKKQLVYLFMGVMVQLVWKERN 130
           CPF T I +     +        W + +N    +  D     L    + V +  +W+ERN
Sbjct: 364 CPFATEIWEPLAKTIYNTCFYTDWQTIINNVSRNWPDRIAGFLARCILQVTIYTLWRERN 423

Query: 129 VRCHNSSP 106
            R H +SP
Sbjct: 424 ERKHGASP 431


>gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]
          Length = 236

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
 Frame = -1

Query: 471 WTNAVWFPLAIPKCSFTLWLALKNRLLTKTRTQQFEMNTDTKCVVCHNADETVEHIFCSC 292
           W   VWF  + PK SF +WLA+ NRL T  R   +       CV+CHNA ET +H+F SC
Sbjct: 102 WYKGVWFGHSTPKYSFCVWLAVLNRLSTGDRMTHWNGGQSAACVLCHNAPETRDHLFFSC 161

Query: 291 PFVTIIAKHSPFDLVG-----KWTSY---LNGNFTSVGDNYKKQLVYLFMGVMVQLVWKE 136
            F +I+  +    + G      W      ++G++ +  D++  +  YLF    V  +W+E
Sbjct: 162 DFASIVWSNLARGIYGDRFSTHWQDLIQAISGSWMTPLDSFFAR--YLFQAT-VHTIWRE 218

Query: 135 RNVRCHNSSP 106
           RN R H   P
Sbjct: 219 RNGRNHGEKP 228


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/128 (35%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
 Frame = -1

Query: 474 AWTNAVWFPLAIPKCSFTLWLALKNRLLTKTRTQQFEMNTDTKCVVCHNADETVEHIFCS 295
           AW   VWF  + PK  F  WLAL+NRL T  R Q +   +D KC  C  + ET +H+F S
Sbjct: 461 AWYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQLWNNGSDVKCTFCSTSIETRDHLFFS 520

Query: 294 CPFV----TIIAKH-SPFDLVGKWTSYLNGNFTSVGDNYKKQLVYLFMGVMVQLVWKERN 130
           C +     T IAK+         W + +N    +  D  +  L      + V  VWKERN
Sbjct: 521 CSYASAIWTAIAKNVLQHRFSTDWQTIVNYISETQTDRIRSFLSRYIFQLTVHTVWKERN 580

Query: 129 VRCHNSSP 106
            R H   P
Sbjct: 581 DRRHGEEP 588


>emb|CAB86676.1| putative protein [Arabidopsis thaliana]
          Length = 534

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
 Frame = -1

Query: 459 VWFPLAIPKCSFTLWLALKNRLLTKTRTQQFEMNTDTKCVVCHNADETVEHIFCSCPFVT 280
           VWFP + PK SF  W+A +NRL T  +  ++  + +  C  C  A ET EHIF SCP+ +
Sbjct: 108 VWFPNSTPKYSFITWIAFRNRLATGEKLVKWNNDANGGCSFCDEAMETREHIFFSCPYSS 167

Query: 279 IIAKHSPFDLVGKWTSYLNGNFTSVGDNYKKQLVYLFM-----GVMVQLVWKERNVRCHN 115
            +      DL+G+  +    + T++  +  +  V++F+      + +  +W+ERN R H 
Sbjct: 168 AVWSALTKDLLGQLFTTSWESMTALLTDPPRPKVHMFVLRYVFQLSIHTLWRERNGRRHG 227

Query: 114 SSPIKPADQAVLGSK 70
           +SPI  +  A L  K
Sbjct: 228 ASPIPSSKLAKLIDK 242


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
 Frame = -1

Query: 474  AWTNAVWFPLAIPKCSFTLWLALKNRLLTKTRTQQFEMNTDTKCVVCHNADETVEHIFCS 295
            AW   VWF  A PK SF  WLA++NRL T  R   +   T T CV C +  ET +H+F  
Sbjct: 777  AWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQ 836

Query: 294  CPFV----TIIAKHSPFDLVG-KWTSYLNGNFTSVGDNYKKQLVYLFMGVMVQLVWKERN 130
            C +     T IAK+   D    KW++ +N    S  D  +  L      V +  +W+ERN
Sbjct: 837  CCYSSEIWTSIAKNVYKDRFSTKWSAVVNYISDSQPDRIQSFLSRYTFQVSIHSIWRERN 896

Query: 129  VRCH 118
             R H
Sbjct: 897  SRRH 900


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