BLASTX nr result

ID: Angelica22_contig00040002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00040002
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACK43221.1| myb-related transcription factor [Panax ginseng]       119   9e-25
dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana...    95   2e-17
dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana...    93   9e-17
emb|CAA78387.1| protein 2 [Petunia x hybrida]                          92   1e-16
ref|NP_001234262.1| myb-related transcription factor [Solanum ly...    92   2e-16

>gb|ACK43221.1| myb-related transcription factor [Panax ginseng]
          Length = 238

 Score =  119 bits (298), Expect = 9e-25
 Identities = 71/168 (42%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
 Frame = -1

Query: 706 RWSAMAAKLPGRTDNEIKNVWHTHIKKKLKNYQ-STRDSKRQKNKESEPQSKNPDFFNHN 530
           RWSAMAAKLPGRTDNEIKNVWHTH+KKKLKNYQ S++   +Q++       KNPDF    
Sbjct: 88  RWSAMAAKLPGRTDNEIKNVWHTHLKKKLKNYQPSSQVVTKQQSMIKSNGHKNPDFSARP 147

Query: 529 EIHGFGYGSISRQNSSEXXXXXXXXXXXXXXXXVMMTTTNIVKQEKLNLSKVSFSEMRER 350
           E+ G   GS S  +S                   +   T  VKQE+++ S+ +F E+ E 
Sbjct: 148 EVCGPPQGSSSELSS-------------------VTVMTTAVKQEQMDSSESTFPEIDES 188

Query: 349 FLPGDIKADQDLKTWFEMEQELKCVESDDGKDFWYNLFIKAQGLQHLP 206
           F      +  +   +     +L C   +DG DFWYNLFI+A  L  LP
Sbjct: 189 FWTQAEDSKMEFSEFRGPNDKLGCQMIEDGMDFWYNLFIRAGELPELP 236


>dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana tabacum]
          Length = 281

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 72/200 (36%), Positives = 100/200 (50%), Gaps = 33/200 (16%)
 Frame = -1

Query: 706 RWSAMAAKLPGRTDNEIKNVWHTHIKKKLKNYQSTRDSKR--QKNKESEPQSKNPDFFN- 536
           RWSA+AA+LPGRTDNEIKNVWHTH+KK+LKNYQ  ++SK+  + N +S+  S +  F N 
Sbjct: 88  RWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQNSKKHSKNNLDSKAPSTSQTFNNS 147

Query: 535 ------HNEIHGFGYGSISRQNSSEXXXXXXXXXXXXXXXXVMMTTT----NIVKQ-EKL 389
                   +I+G   G  S Q SS                  M T T    N+ KQ +++
Sbjct: 148 DNFSNIQEDINGPVTGPNSPQRSSS------EMSTVTADSTAMTTITIDDQNMFKQLDEM 201

Query: 388 NLSKVSFSEMRERFLPGDIKADQDLKTWFEME---QELKC----------------VESD 266
           N S+    E+ E F   D+    +    F+ME   +EL+                  + +
Sbjct: 202 NSSESFIPEIDESFWTNDLSTGDNSN--FDMEGTGEELQVQFPFSSVKQESMDMVGTKLE 259

Query: 265 DGKDFWYNLFIKAQGLQHLP 206
           D  DFWYN+FIK+  L  LP
Sbjct: 260 DDMDFWYNVFIKSGDLLDLP 279


>dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana tabacum]
          Length = 281

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 69/198 (34%), Positives = 98/198 (49%), Gaps = 31/198 (15%)
 Frame = -1

Query: 706 RWSAMAAKLPGRTDNEIKNVWHTHIKKKLKNYQSTRDSKR--QKNKESEPQSKNPDFFN- 536
           RWSA+AA+LPGRTDNEIKNVWHTH+KK+LKNYQ  ++SKR  + N +S+  S +  F N 
Sbjct: 88  RWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQNSKRHSKNNLDSKAPSTSQTFNNS 147

Query: 535 ------HNEIHGFGYGSISRQNSSEXXXXXXXXXXXXXXXXVMMTTT----NIVKQ-EKL 389
                   +I+G   G  S Q SS                  M T T    N+ KQ +++
Sbjct: 148 DNFSNIQEDINGPVTGPNSPQRSSS------EMSTVTVDSTAMTTITIDDQNMFKQLDEM 201

Query: 388 NLSKVSFSEMRERFLPGDIKADQ-----------DLKTWF------EMEQELKCVESDDG 260
           + S+    E+ E F   D+               +L+  F      +   ++   + +D 
Sbjct: 202 DSSENFIPEIDESFWTDDLSTSDNSTFGMEGTGGELQVQFPFSSVKQESMDMVGAKLEDD 261

Query: 259 KDFWYNLFIKAQGLQHLP 206
            DFWYN+FIK+  L  LP
Sbjct: 262 MDFWYNVFIKSGDLLDLP 279


>emb|CAA78387.1| protein 2 [Petunia x hybrida]
          Length = 280

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 65/192 (33%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
 Frame = -1

Query: 706 RWSAMAAKLPGRTDNEIKNVWHTHIKKKLKNYQSTRDSKR-QKNKESEPQSKNPDFFNHN 530
           RWSA+AA+LPGRTDNEIKNVWHTH+KK+LKNYQ  ++SKR  KN             +++
Sbjct: 88  RWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQNSKRHSKNNHDSKAPSTSKMLDNS 147

Query: 529 EIHGFGYGSISRQNSSEXXXXXXXXXXXXXXXXVMMTT--TN----IVKQEKLNLSKVSF 368
           E       +I+   +                   +  T  TN     +K E+++ S  +F
Sbjct: 148 ESFSTIQENINEPMTGPNSPQRSSSESSTVTADSLAATDVTNDDQTFIKHEEMD-SYENF 206

Query: 367 SEMRERFLPGDIKADQDLKTWFEM----------------EQELKCV--ESDDGKDFWYN 242
            E+ E F   D+    +L    E+                EQ +  V  + +D  DFWYN
Sbjct: 207 PEIDESFWTEDLSMGDNLDLDMEVAGEKSQVQFPYSHDMKEQSVDMVGAKLEDDMDFWYN 266

Query: 241 LFIKAQGLQHLP 206
           +FIKA+ L  LP
Sbjct: 267 VFIKAEDLLDLP 278


>ref|NP_001234262.1| myb-related transcription factor [Solanum lycopersicum]
           gi|1370140|emb|CAA66952.1| THM18 [Solanum lycopersicum]
          Length = 265

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
 Frame = -1

Query: 706 RWSAMAAKLPGRTDNEIKNVWHTHIKKKLKNYQSTRDSKRQKNKESEPQSKNP---DFFN 536
           RWSA+AA+LPGRTDNEIKN+WHT++KKKLKNYQ  ++SKR  +K S   +K P   +  N
Sbjct: 88  RWSAIAARLPGRTDNEIKNIWHTNLKKKLKNYQPCQNSKRH-SKTSHVSNKGPTTSESSN 146

Query: 535 HNEIHGFGYGSISRQNSSEXXXXXXXXXXXXXXXXVMMTTTNIVKQEKLNLSKVS-FSEM 359
           ++++       I    +S                   M    I+K+EK+  S    F ++
Sbjct: 147 NSDLSTSTKQHIKIAPNSPQLSSSEMSSVTLVVDDNQMV---IIKEEKIESSSSEYFPKI 203

Query: 358 RERFLPGDIKADQDLKTWFEMEQELK---------CVESDDGKDFWYNLFIKAQGLQHLP 206
            E F   ++  + ++    + E +++           + ++  DFWYN+FIK   L  LP
Sbjct: 204 DESFWADELSTENNMIIGHDQEIQVREENVDIFTTSSKMEEDMDFWYNVFIKTGDLPELP 263


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