BLASTX nr result

ID: Angelica22_contig00039988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039988
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546179.1| PREDICTED: transcription initiation factor I...    97   1e-18
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...    95   5e-18
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...    92   3e-17
ref|XP_003534809.1| PREDICTED: transcription initiation factor I...    92   6e-17
ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>ref|XP_003546179.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Glycine max]
          Length = 539

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = +2

Query: 131 CGVCGSMTELYGSNCKHLTLCVSCGKSMAEKRTKCYDCGATITRLIREYN 280
           C  CGS T+LYGSNCKH+TLC+SCGK+MAEKR KC+DCGAT+TRLIREYN
Sbjct: 11  CSGCGSTTDLYGSNCKHMTLCLSCGKTMAEKRAKCFDCGATLTRLIREYN 60


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
           PREDICTED: transcription initiation factor IIF subunit
           alpha-like [Cucumis sativus]
          Length = 538

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +2

Query: 131 CGVCGSMTELYGSNCKHLTLCVSCGKSMAEKRTKCYDCGATITRLIREYN 280
           C  CGS TELYGSNCKH+TLC++CGK+MAE + KCYDCGAT+TRLIREYN
Sbjct: 11  CSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYN 60


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
           gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
           [Ricinus communis]
          Length = 533

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 39/60 (65%), Positives = 48/60 (80%)
 Frame = +2

Query: 101 ASMKMSGGDLCGVCGSMTELYGSNCKHLTLCVSCGKSMAEKRTKCYDCGATITRLIREYN 280
           A+M +     C  CGS T+LYGSNCKH+TLC+SCGK+MAE   KC+DCGAT++RLIREYN
Sbjct: 2   ATMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYN 61


>ref|XP_003534809.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Glycine max]
          Length = 541

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = +2

Query: 131 CGVCGSMTELYGSNCKHLTLCVSCGKSMAEKRTKCYDCGATITRLIREYN 280
           C  CGS T+LYGSNCKH+TLC+ CGK+MA KR KC DCGAT+TRLIREYN
Sbjct: 11  CSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN 60


>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = +2

Query: 131 CGVCGSMTELYGSNCKHLTLCVSCGKSMAEKRTKCYDCGATITRLIREYN 280
           C  CGS T+LYGSNCKH+TLC++CGK+MAE R KC+DCGA +TRLIREYN
Sbjct: 11  CSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60


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