BLASTX nr result
ID: Angelica22_contig00039987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00039987
(311 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containi... 94 9e-18
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] 87 1e-15
ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group] g... 72 5e-11
dbj|BAD10279.1| pentatricopeptide (PPR) repeat-containing protei... 72 5e-11
>ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 94.4 bits (233), Expect = 9e-18
Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Frame = +1
Query: 88 RFKFFATAT-----SSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQ 252
R FF AT + N I +LSRAG +DAARKLF+EM KDVV+WNS+++AYWQ
Sbjct: 13 RHSFFVLATLFSSTRDVYHANLDIVALSRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQ 72
Query: 253 NGFLQESKTLFHSMPERNV 309
NG LQ SK LFHSMP RNV
Sbjct: 73 NGLLQRSKALFHSMPLRNV 91
>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 88.6 bits (218), Expect = 5e-16
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +1
Query: 79 HQIRFKFFATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNG 258
H + K F+T + A N +I +L+RAGNI AAR+LF+EMP++D VSWNSIIT YW+NG
Sbjct: 35 HPLSIKLFST--QDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKNG 92
Query: 259 FLQESKTLFHSMPERNV 309
ESK LF MP +NV
Sbjct: 93 CFDESKRLFGLMPTKNV 109
Score = 57.4 bits (137), Expect = 1e-06
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = +1
Query: 118 SLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQESKTLFHSMP 297
++++ A + ++ G I+ AR LF MP K+VVSW +I+ Y +NG E++ LF MP
Sbjct: 170 NVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMP 229
Query: 298 ERNV 309
++N+
Sbjct: 230 DKNI 233
Score = 55.1 bits (131), Expect = 6e-06
Identities = 24/71 (33%), Positives = 46/71 (64%)
Frame = +1
Query: 97 FFATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQESK 276
F A + + NA I+ L R ++ A +LFEEMP ++V+S+ +++ Y + G +++++
Sbjct: 132 FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQAR 191
Query: 277 TLFHSMPERNV 309
LF+ MP++NV
Sbjct: 192 ALFNCMPQKNV 202
>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 87.4 bits (215), Expect = 1e-15
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +1
Query: 79 HQIRFKFFATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNG 258
H + K F+T + A N +I +L+RAGNI AAR++F+EMP++D VSWNSIIT YW+NG
Sbjct: 35 HPLSIKLFST--QDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWKNG 92
Query: 259 FLQESKTLFHSMPERNV 309
ESK LF MP +NV
Sbjct: 93 CFDESKRLFGLMPTKNV 109
Score = 57.4 bits (137), Expect = 1e-06
Identities = 24/64 (37%), Positives = 41/64 (64%)
Frame = +1
Query: 118 SLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQESKTLFHSMP 297
++++ A + ++ G I+ AR LF MP K+VVSW +I+ Y +NG E++ LF MP
Sbjct: 170 NVISYTAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMP 229
Query: 298 ERNV 309
++N+
Sbjct: 230 DKNI 233
Score = 55.1 bits (131), Expect = 6e-06
Identities = 24/71 (33%), Positives = 46/71 (64%)
Frame = +1
Query: 97 FFATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQESK 276
F A + + NA I+ L R ++ A +LFEEMP ++V+S+ +++ Y + G +++++
Sbjct: 132 FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQAR 191
Query: 277 TLFHSMPERNV 309
LF+ MP++NV
Sbjct: 192 ALFNCMPQKNV 202
>ref|NP_001062062.1| Os08g0481000 [Oryza sativa Japonica Group]
gi|42409025|dbj|BAD10278.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113624031|dbj|BAF23976.1| Os08g0481000 [Oryza
sativa Japonica Group] gi|215715342|dbj|BAG95093.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222640747|gb|EEE68879.1| hypothetical protein
OsJ_27695 [Oryza sativa Japonica Group]
Length = 563
Score = 72.0 bits (175), Expect = 5e-11
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +1
Query: 79 HQIRFKFFATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNG 258
H++R ++ LV N +IT+L+RAG++ AAR++F+ MP +D VSWN+++TA W+ G
Sbjct: 2 HRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAG 61
Query: 259 -FLQESKTLFHSMPERNV 309
L +++LF MP RNV
Sbjct: 62 RDLPAARSLFDDMPSRNV 79
Score = 61.6 bits (148), Expect = 6e-08
Identities = 25/64 (39%), Positives = 45/64 (70%)
Frame = +1
Query: 118 SLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQESKTLFHSMP 297
++V+ + L+R G + +AR+LF+ MP +++VSW ++I+ Y N L+E++ LF +MP
Sbjct: 140 NVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMP 199
Query: 298 ERNV 309
E+NV
Sbjct: 200 EKNV 203
Score = 60.5 bits (145), Expect = 1e-07
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +1
Query: 103 ATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQESKTL 282
A SS+ CNA +T S+ GN+D + +F + ++D+VSWN+II AY Q+G Q+ L
Sbjct: 298 AMLESSISICNALMTMYSKCGNVDESELVFMSLKSQDIVSWNTIIAAYAQHGRYQKVIAL 357
Query: 283 FHSM 294
FH M
Sbjct: 358 FHEM 361
Score = 56.6 bits (135), Expect = 2e-06
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 97 FFATATSSLVACNAKITSLSRAG-NIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQES 273
F A V+ NA +T+L RAG ++ AAR LF++MP+++V+SWNSII +G L +
Sbjct: 39 FDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAA 98
Query: 274 KTLFHSMPERNV 309
F P RNV
Sbjct: 99 SAYFARAPRRNV 110
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +1
Query: 82 QIRFKFFATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGF 261
+ R F A ++VAC A IT + G++ AR+LF+ + KDV+SWN+II+ Y NG
Sbjct: 190 EARKLFEAMPEKNVVACTAMITGYCKEGDLQNARRLFDGIRAKDVISWNAIISGYVHNGL 249
Query: 262 LQESKTLF 285
+E+ L+
Sbjct: 250 GEEATKLY 257
>dbj|BAD10279.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 266
Score = 72.0 bits (175), Expect = 5e-11
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +1
Query: 79 HQIRFKFFATATSSLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNG 258
H++R ++ LV N +IT+L+RAG++ AAR++F+ MP +D VSWN+++TA W+ G
Sbjct: 2 HRLRHHAALASSRLLVRDNQRITALARAGDVAAARRVFDAMPRRDAVSWNALLTALWRAG 61
Query: 259 -FLQESKTLFHSMPERNV 309
L +++LF MP RNV
Sbjct: 62 RDLPAARSLFDDMPSRNV 79
Score = 61.6 bits (148), Expect = 6e-08
Identities = 25/64 (39%), Positives = 45/64 (70%)
Frame = +1
Query: 118 SLVACNAKITSLSRAGNIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQESKTLFHSMP 297
++V+ + L+R G + +AR+LF+ MP +++VSW ++I+ Y N L+E++ LF +MP
Sbjct: 140 NVVSYTTMVDGLARCGEVASARELFDAMPTRNLVSWAAMISGYVDNNMLEEARKLFEAMP 199
Query: 298 ERNV 309
E+NV
Sbjct: 200 EKNV 203
Score = 56.6 bits (135), Expect = 2e-06
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 97 FFATATSSLVACNAKITSLSRAG-NIDAARKLFEEMPNKDVVSWNSIITAYWQNGFLQES 273
F A V+ NA +T+L RAG ++ AAR LF++MP+++V+SWNSII +G L +
Sbjct: 39 FDAMPRRDAVSWNALLTALWRAGRDLPAARSLFDDMPSRNVISWNSIIAGCLAHGDLAAA 98
Query: 274 KTLFHSMPERNV 309
F P RNV
Sbjct: 99 SAYFARAPRRNV 110