BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039856
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...   241   6e-62
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]   240   1e-61
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...   230   1e-58
ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
ref|XP_002533225.1| pentatricopeptide repeat-containing protein,...   218   5e-55

>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Vitis vinifera]
          Length = 778

 Score =  241 bits (615), Expect = 6e-62
 Identities = 118/187 (63%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
 Frame = -1

Query: 558  EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
            EG+VEKAF+FHN+MVEN FKPD++T NILL+GLC EG+LEKAL+LFNTW+SK K +D VT
Sbjct: 571  EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVT 630

Query: 378  YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            YNTLIT+LCK GR+DDA  L++EM EK+LGPD YTYNAI++ALTD+GR+ EAE+ +SKM+
Sbjct: 631  YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690

Query: 198  AMDKLSEGSAPSGK-EQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQR 22
                L +      K E   T +T +E D +SVAYSE I ELC +GKYKDA++ FGE  Q+
Sbjct: 691  EKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQK 750

Query: 21   GITLDKS 1
            GIT+DKS
Sbjct: 751  GITVDKS 757



 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
 Frame = -1

Query: 555 GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
           G +++A      M +N   PD++T N+L+ GLC EG +E+A +L +   + +   D V+Y
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351

Query: 375 NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM-- 202
           NTLI    +  +I +A  L+ EM EK + P+  T+N ++      G+M++A + ++KM  
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411

Query: 201 -------IAMDKLSEGSAPSGKEQDATCKTQQE-----VDLNSVAYSEHINELCIKGKYK 58
                  +  + L  G   +G   +A  +T  E     + ++SV  +  +  LC + K +
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEA-FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470

Query: 57  DAIQTFGELSQRGITLDK 4
           +A +      +RG  +D+
Sbjct: 471 EAYKLLSSARKRGYFIDE 488



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
 Frame = -1

Query: 555  GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
            GN+ +AFR  + M     K D  T N +L+ LCRE  LE+A +L ++   +   +D V+Y
Sbjct: 432  GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 375  NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEA----EDLVS 208
             TLI    K G +D AL L  EM EK++ P   TYN I+  L   G+ E+A     +L+ 
Sbjct: 492  GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 207  KMIAMDKLSEGSAPSG--KEQDATCKTQQEVDLNSVAYSEHI-------NELCIKGKYKD 55
              +  D+ +  +   G  +E D     Q    +   ++   +         LC++G  + 
Sbjct: 552  SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEK 611

Query: 54   AIQTFGELSQRGITLD 7
            A++ F     +G  +D
Sbjct: 612  ALKLFNTWVSKGKAID 627



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/184 (26%), Positives = 83/184 (45%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           +GNV++A +  + M E    P   T N ++ GLC+ G  E+A+   N  +      D  T
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
           YNT++   C+ G ++ A     +M E    PD +T N +L  L   G +E+A  L +  +
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWV 620

Query: 198 AMDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
                S+G A                 +++V Y+  I  LC +G+  DA     E+ ++ 
Sbjct: 621 -----SKGKA-----------------IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658

Query: 18  ITLD 7
           +  D
Sbjct: 659 LGPD 662



 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           E   + A  F N M +    PD  T N +L  LC++G L  A  L     S+    +  T
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNT 280

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM- 202
           YN L+   CK G + +A  +I  M +  L PD +TYN +++ L + GR+EEA  L  +M 
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340

Query: 201 --------IAMDKLSEGSAPSGKEQDA----TCKTQQEVDLNSVAYSEHINELCIKGKYK 58
                   ++ + L  G     K  +A       +++ V  N+V ++  +   C +GK  
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 57  DAIQTFGELSQRGITLD 7
           DA  T  ++ + G + D
Sbjct: 401 DASNTITKMEESGFSPD 417



 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 46/186 (24%), Positives = 87/186 (46%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           EG ++ A     +M E+ F PD  T N L+ G C+ G + +A R  +    K  ++D+VT
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            NT++  LC+  ++++A  L++   ++    D+ +Y  ++      G ++ A  L  +M 
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM- 514

Query: 198 AMDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
                                 ++E+  ++V Y+  I  LC  GK + AI    EL + G
Sbjct: 515 ---------------------KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 18  ITLDKS 1
           +  D++
Sbjct: 554 LLPDET 559



 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 14/175 (8%)
 Frame = -1

Query: 498 PDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTYNTLITALCKAGRIDDALGL 319
           P++ T NI++ G C E   + A+   N         D VTYNT++  LCK GR+ DA  L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL 265

Query: 318 ITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI---------AMDKLSEGSAP 166
           + +M  + L P++ TYN ++      G ++EA +++  M            + L  G   
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 165 SGKEQDATCKTQQEVD-----LNSVAYSEHINELCIKGKYKDAIQTFGELSQRGI 16
            G+ ++A  K + E++      + V+Y+  IN      K  +A +   E+S++G+
Sbjct: 326 EGRIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  240 bits (613), Expect = 1e-61
 Identities = 120/192 (62%), Positives = 149/192 (77%), Gaps = 6/192 (3%)
 Frame = -1

Query: 558  EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
            EG+VEKAF+FHN+MVEN FKPD++T NILL+GLC EGMLEKAL+LFNTW+SK K +D VT
Sbjct: 571  EGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVT 630

Query: 378  YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            YNTLIT+LCK GR+DDA  L++EM EK+LGPD YTYNAI++ALTD+GR+ EAE+ +SKM 
Sbjct: 631  YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM- 689

Query: 198  AMDKLSEGSAP------SGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFG 37
                L +G  P         E   T +T +E D +SVAYSE I ELC +GKYKDA++ FG
Sbjct: 690  ----LEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFG 745

Query: 36   ELSQRGITLDKS 1
            E  Q+GIT+DKS
Sbjct: 746  ESKQKGITVDKS 757



 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
 Frame = -1

Query: 555 GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
           G +++A      M +N   PD++T N+L+ GLC EG +E+A +L +   + +   D V+Y
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351

Query: 375 NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM-- 202
           NTLI    +  +I +A  L+ EM EK + P+  T+N ++      G+M++A + ++KM  
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411

Query: 201 -------IAMDKLSEGSAPSGKEQDATCKTQQE-----VDLNSVAYSEHINELCIKGKYK 58
                  +  + L  G   +G   +A  +T  E     + ++SV  +  +  LC + K +
Sbjct: 412 SGFSPDCVTYNTLINGYCKAGNMGEA-FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470

Query: 57  DAIQTFGELSQRGITLDK 4
           +A +      +RG  +D+
Sbjct: 471 EAYKLLSSARKRGYFIDE 488



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
 Frame = -1

Query: 555  GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
            GN+ +AFR  + M     K D  T N +L+ LCRE  LE+A +L ++   +   +D V+Y
Sbjct: 432  GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 375  NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEA----EDLVS 208
             TLI    K G +D AL L  EM EK++ P   TYN I+  L   G+ E+A     +L+ 
Sbjct: 492  GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 207  KMIAMDKLSEGSAPSG--KEQDATCKTQQEVDLNSVAYSEHI-------NELCIKGKYKD 55
              +  D+ +  +   G  +E D     Q    +   ++   +         LC++G  + 
Sbjct: 552  SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEK 611

Query: 54   AIQTFGELSQRGITLD 7
            A++ F     +G  +D
Sbjct: 612  ALKLFNTWVSKGKAID 627



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/184 (26%), Positives = 83/184 (45%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           +GNV++A +  + M E    P   T N ++ GLC+ G  E+A+   N  +      D  T
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
           YNT++   C+ G ++ A     +M E    PD +T N +L  L   G +E+A  L +  +
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWV 620

Query: 198 AMDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
                S+G A                 +++V Y+  I  LC +G+  DA     E+ ++ 
Sbjct: 621 -----SKGKA-----------------IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658

Query: 18  ITLD 7
           +  D
Sbjct: 659 LGPD 662



 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           E   + A  F N M +    PD  T N +L  LC++G L  A  L     S+    +  T
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNT 280

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM- 202
           YN L+   CK G + +A  +I  M +  L PD +TYN +++ L + GR+EEA  L  +M 
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340

Query: 201 --------IAMDKLSEGSAPSGKEQDA----TCKTQQEVDLNSVAYSEHINELCIKGKYK 58
                   ++ + L  G     K  +A       +++ V  N+V ++  +   C +GK  
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 57  DAIQTFGELSQRGITLD 7
           DA  T  ++ + G + D
Sbjct: 401 DASNTITKMEESGFSPD 417



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
 Frame = -1

Query: 498 PDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTYNTLITALCKAGRIDDALGL 319
           P++ T NI++ G C E   + A+   N         D VTYNT++ ALCK GR+ DA  L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL 265

Query: 318 ITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI---------AMDKLSEGSAP 166
           + +M  + L P++ TYN ++      G ++EA +++  M            + L  G   
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 165 SGKEQDATCKTQQEVD-----LNSVAYSEHINELCIKGKYKDAIQTFGELSQRGI 16
            G+ ++A  K + E++      + V+Y+  IN      K  +A +   E+S++G+
Sbjct: 326 EGRIEEA-FKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379



 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 46/186 (24%), Positives = 87/186 (46%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           EG ++ A     +M E+ F PD  T N L+ G C+ G + +A R  +    K  ++D+VT
Sbjct: 396 EGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            NT++  LC+  ++++A  L++   ++    D+ +Y  ++      G ++ A  L  +M 
Sbjct: 456 LNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM- 514

Query: 198 AMDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
                                 ++E+  ++V Y+  I  LC  GK + AI    EL + G
Sbjct: 515 ---------------------KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 18  ITLDKS 1
           +  D++
Sbjct: 554 LLPDET 559


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score =  230 bits (587), Expect = 1e-58
 Identities = 113/187 (60%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
 Frame = -1

Query: 558  EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
            EG VEKAF+FHN+MV+  FKPD++T NILL+GLC EGML+KAL+LFNTWISK K +DAVT
Sbjct: 575  EGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVT 634

Query: 378  YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            YNT+I+ LCK  R ++A  L+ EM EKKLGPD YTYNAILSAL DAGRM+EAE+ +S+++
Sbjct: 635  YNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIV 694

Query: 198  AMDKLSEGSAPSGKEQ-DATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQR 22
               KL + +    K + +++ +T QE D NSV +SE INELC +GKYKDA+    E +Q+
Sbjct: 695  EQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQK 754

Query: 21   GITLDKS 1
            GITL KS
Sbjct: 755  GITLHKS 761



 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
 Frame = -1

Query: 555 GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
           G +++A +  + M +N   PD++T N+L+ GLC++G +++A RL +   + +   D VTY
Sbjct: 296 GWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTY 355

Query: 375 NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM-- 202
           NTLI              LI +M  K + P+  TYN ++      G+M+ A + + KM  
Sbjct: 356 NTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 415

Query: 201 -------IAMDKLSEGSAPSGKEQDA----TCKTQQEVDLNSVAYSEHINELCIKGKYKD 55
                  +  + L  G   +G+  +A       +++ + +NSV  +  ++ LC + K  D
Sbjct: 416 SGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 475

Query: 54  AIQTFGELSQRGITLDK 4
           A +     S+RG  +D+
Sbjct: 476 AYKLLSSASKRGYFVDE 492



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
 Frame = -1

Query: 519 MVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTYNTLITALCKAGR 340
           M  N   P+  T NIL+ G C+ G L++A ++ +         D  TYN LI  LCK G+
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332

Query: 339 IDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM---------IAMDK 187
           ID+A  L  EM   KL PD  TYN +++   D     +  +L+ KM         +  + 
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392

Query: 186 LSEGSAPSGKEQDATCKTQQEVDL----NSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
           + +     GK  +A  + ++  +     + V ++  IN  C  G+  +A +   E+S++G
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452

Query: 18  ITLD 7
           + ++
Sbjct: 453 LKMN 456



 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 47/186 (25%), Positives = 85/186 (45%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           EG ++ A     +M E+ F PD  T N L+ G C+ G L +A R+ +    K  ++++VT
Sbjct: 400 EGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 459

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            NT++  LC   ++DDA  L++   ++    D+ +Y  ++      G+  EA  L  +M 
Sbjct: 460 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEM- 518

Query: 198 AMDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
                                 ++E+  + + Y+  I  LC  GK   +I    EL + G
Sbjct: 519 ---------------------KEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG 557

Query: 18  ITLDKS 1
           +  D++
Sbjct: 558 LVPDET 563



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
 Frame = -1

Query: 540 AFRFHNRMVENCFKPDMYTSNILLQGLCR-----EGMLEKALRLFNTWISKEKQLDAVTY 376
           A +  NRM     KP++ T N L+  L R        L KA+  F+  I    +++  T+
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI--FSDVIKLGVKVNTNTF 215

Query: 375 NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMIA 196
           N LI   C   ++ +A+GLI +M +    PD  +YN IL  L   G++ EA DL+     
Sbjct: 216 NILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLL----- 270

Query: 195 MDKLSEGSAPSGKE----QDATCK------TQQEVDL---NSV-----AYSEHINELCIK 70
           +D  + G  P+           CK        Q +DL   N+V      Y+  I  LC  
Sbjct: 271 LDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKD 330

Query: 69  GKYKDAIQTFGEL 31
           GK  +A +   E+
Sbjct: 331 GKIDEAFRLKDEM 343


>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Cucumis sativus] gi|449529106|ref|XP_004171542.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  219 bits (558), Expect = 2e-55
 Identities = 105/186 (56%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
 Frame = -1

Query: 558  EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
            EGNVEKAF+FHN M+EN FKPD+YT NILL+GLCREGMLEKAL+LFNT +SK K +D VT
Sbjct: 576  EGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVT 635

Query: 378  YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            YNT+I++LCK G+ ++A  L+TEM  KKLGPD+YTY  I++ALTDAGR++EAE+   KM+
Sbjct: 636  YNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMV 695

Query: 198  AMDKLSEGSAPSGKEQDA-TCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQR 22
                + + +   GK Q+  T +  +  D  S+AYS+ INELC + KYKDA+  F E+++ 
Sbjct: 696  ESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKE 755

Query: 21   GITLDK 4
            G+ L+K
Sbjct: 756  GVALNK 761



 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 46/185 (24%), Positives = 85/185 (45%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           +G +++AFR  + M +    PD+ T N L+ G  +     +   L      K  + +AVT
Sbjct: 331 DGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVT 390

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
           YN ++  +CK G + +A   + +M E  L PD  TYN ++ A   AG+M +A  ++ +M 
Sbjct: 391 YNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM- 449

Query: 198 AMDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
                                T + + +++   +  ++ LC++ K  +A       S+RG
Sbjct: 450 ---------------------TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRG 488

Query: 18  ITLDK 4
             LD+
Sbjct: 489 YILDE 493



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/181 (24%), Positives = 78/181 (43%)
 Frame = -1

Query: 546 EKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTYNTL 367
           ++A    + M E    P   T N ++ GLC+   +++A+   N  +      D  TYN +
Sbjct: 510 DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNII 569

Query: 366 ITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMIAMDK 187
           I   C  G ++ A     EM E    PD YT N +L  L   G +E+A  L + +++  K
Sbjct: 570 IHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGK 629

Query: 186 LSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRGITLD 7
                                 D++ V Y+  I+ LC +GK+++A     E+  + +  D
Sbjct: 630 ----------------------DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPD 667

Query: 6   K 4
           +
Sbjct: 668 Q 668



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 49/175 (28%), Positives = 80/175 (45%)
 Frame = -1

Query: 555 GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
           G + KAFR  + M     K D +T N +L  LC E  L++A  L  +   +   LD V+Y
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496

Query: 375 NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMIA 196
             LI    K  + D AL L  EM E+++ P   TYN+++  L  + ++++A D +++M  
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEM-- 554

Query: 195 MDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGEL 31
              L  G  P                 +   Y+  I+  C++G  + A Q   E+
Sbjct: 555 ---LENGLVP-----------------DETTYNIIIHGFCLEGNVEKAFQFHNEM 589



 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 49/183 (26%), Positives = 79/183 (43%)
 Frame = -1

Query: 555 GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
           G +++A +    M  N   P ++T N+L+ G C +G +++A R+ +         D VTY
Sbjct: 297 GLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTY 356

Query: 375 NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMIA 196
           NTLI    +     +   LI EM +K +  +  TYN IL  +   G M EA   + KM  
Sbjct: 357 NTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM-- 414

Query: 195 MDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRGI 16
                 G +P                 + V Y+  I   C  GK   A +   E++ +G+
Sbjct: 415 ---EENGLSP-----------------DCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGL 454

Query: 15  TLD 7
            +D
Sbjct: 455 KID 457



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 13/197 (6%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           E  V+ A  + N+M E    PD  + N +L  L +  +L++A  L     SK    +  T
Sbjct: 226 ESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHT 285

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
           YN L+   C+ G + +A  +I  M    L P  +TYN +++   + G+++EA  +  +M 
Sbjct: 286 YNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345

Query: 198 AMDKLSE--------GSAPSGKEQDATCKTQQEVD-----LNSVAYSEHINELCIKGKYK 58
            M+ L +              ++        +E+D      N+V Y+  +  +C KG   
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMT 405

Query: 57  DAIQTFGELSQRGITLD 7
           +A  T  ++ + G++ D
Sbjct: 406 EATTTLDKMEENGLSPD 422


>ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526957|gb|EEF29157.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 605

 Score =  218 bits (555), Expect = 5e-55
 Identities = 107/187 (57%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           EG V+KAF F N+MV+  FKPD++T NIL++GLC EGML+KAL+LF TWISK K +DAVT
Sbjct: 407 EGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVT 466

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
           +NT+I+ LC+ GR ++A  L+ EM EKKLGPD YT+NAILSAL DAGRM+EAE+ +S ++
Sbjct: 467 FNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIV 526

Query: 198 AMDKLSEGSAPSGKEQ-DATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQR 22
              KL + +    K + +++ +T QE D NSVA+SE INELC +GKYKDA+    E +Q+
Sbjct: 527 EQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQK 586

Query: 21  GITLDKS 1
           GI L KS
Sbjct: 587 GIILHKS 593



 Score = 71.6 bits (174), Expect = 8e-11
 Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
 Frame = -1

Query: 555 GNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTY 376
           G +++A    + M  N   PD+ T   L+ GLC++G +++A RL +   + +     VTY
Sbjct: 132 GWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTY 191

Query: 375 NTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM-- 202
           N LI    +         LI EM  K + P+  TYN ++      G+M+ A + + KM  
Sbjct: 192 NMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 251

Query: 201 -------IAMDKLSEGSAPSGKEQDA----TCKTQQEVDLNSVAYSEHINELCIKGKYKD 55
                  +  + LS G   +G+  +A       +++ + +NSV  +  ++ LC + K  D
Sbjct: 252 SGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 311

Query: 54  AIQTFGELSQRGITLDK 4
           A +     S+RG  +D+
Sbjct: 312 AYKLLSSASKRGYFVDE 328



 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 46/186 (24%), Positives = 81/186 (43%)
 Frame = -1

Query: 558 EGNVEKAFRFHNRMVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVT 379
           EG ++ A     +M E+ F PD  T N L  G C+ G L +A R+ +    K  ++++VT
Sbjct: 236 EGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 295

Query: 378 YNTLITALCKAGRIDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKMI 199
            NT++  LC   ++DDA  L++   ++    D+ +Y  ++      G          K  
Sbjct: 296 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG----------KSX 345

Query: 198 AMDKLSEGSAPSGKEQDATCKTQQEVDLNSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
             D++ E                +E+  + + Y   I  LC  GK   +I    EL + G
Sbjct: 346 XWDEMKE----------------KEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESG 389

Query: 18  ITLDKS 1
           +  D++
Sbjct: 390 LVPDQT 395



 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
 Frame = -1

Query: 519 MVENCFKPDMYTSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTYNTLITALCKAGR 340
           M  N   P+  T NIL+ G C+ G L++A  + +         D  TY TLI  LCK G+
Sbjct: 109 MKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGK 168

Query: 339 IDDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM---------IAMDK 187
           ID+A  L  EM   KL P   TYN +++   +     +  +L+ +M         +  + 
Sbjct: 169 IDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNV 228

Query: 186 LSEGSAPSGKEQDATCKTQQEVDL----NSVAYSEHINELCIKGKYKDAIQTFGELSQRG 19
           + +     GK  +A  + ++  +     + V ++   N  C  G+  +A +   E+S++G
Sbjct: 229 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288

Query: 18  ITLD 7
           + ++
Sbjct: 289 LKMN 292



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 31/95 (32%), Positives = 53/95 (55%)
 Frame = -1

Query: 486 TSNILLQGLCREGMLEKALRLFNTWISKEKQLDAVTYNTLITALCKAGRIDDALGLITEM 307
           T NIL+ G C E  L +A+ L           D V+YNT++  LCK G++++A  L+ +M
Sbjct: 50  TFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM 109

Query: 306 GEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM 202
               L P++ T+N ++S     G ++EA +++  M
Sbjct: 110 KNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIM 144



 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
 Frame = -1

Query: 501 KPDMYTSNILLQGLCR-----EGMLEKALRLFNTWISKEKQLDAVTYNTLITALCKAGRI 337
           KP++ T N L++ L R        L KA+  F+  I    +++  T+N LI   C   ++
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAI--FSDVIKLGVEVNTNTFNILICGCCIENKL 64

Query: 336 DDALGLITEMGEKKLGPDKYTYNAILSALTDAGRMEEAEDLVSKM 202
            +A+GLI +M      PD  +YN IL  L   G++ EA DL+  M
Sbjct: 65  SEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM 109