BLASTX nr result

ID: Angelica22_contig00039855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039855
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]   122   4e-26
ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
ref|XP_002326371.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arab...   103   3e-20

>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
           protein product [Vitis vinifera]
          Length = 890

 Score =  122 bits (307), Expect = 4e-26
 Identities = 62/135 (45%), Positives = 97/135 (71%), Gaps = 6/135 (4%)
 Frame = -3

Query: 389 LSAQLLPILSTPNWEKHPSLKTLVPSISSTNLTCFFDENPCINPHVAVSFLDFVAKKPNF 210
           LSAQLL ILS PNW+KHPSL+ L+PS++ ++++  F  N  ++P  A+SF +++A +P F
Sbjct: 40  LSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFN--LDPQTALSFFNWIALRPGF 97

Query: 209 KANARLYASLLSILVQNKLVGMADKICVLMIKSCESIDDAKFVEGLLRGL------EFRV 48
           K N   Y+S+L+IL++ +L+G+A+KI + MIKSC SI+D  FV  + R +      +F+ 
Sbjct: 98  KHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKP 157

Query: 47  GVRCYNTLLMTLCRF 3
            +RCYNT+LM+L +F
Sbjct: 158 TLRCYNTILMSLSKF 172


>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  122 bits (307), Expect = 4e-26
 Identities = 62/135 (45%), Positives = 97/135 (71%), Gaps = 6/135 (4%)
 Frame = -3

Query: 389 LSAQLLPILSTPNWEKHPSLKTLVPSISSTNLTCFFDENPCINPHVAVSFLDFVAKKPNF 210
           LSAQLL ILS PNW+KHPSL+ L+PS++ ++++  F  N  ++P  A+SF +++A +P F
Sbjct: 40  LSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFN--LDPQTALSFFNWIALRPGF 97

Query: 209 KANARLYASLLSILVQNKLVGMADKICVLMIKSCESIDDAKFVEGLLRGL------EFRV 48
           K N   Y+S+L+IL++ +L+G+A+KI + MIKSC SI+D  FV  + R +      +F+ 
Sbjct: 98  KHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKP 157

Query: 47  GVRCYNTLLMTLCRF 3
            +RCYNT+LM+L +F
Sbjct: 158 TLRCYNTILMSLSKF 172


>ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
           gi|449522905|ref|XP_004168466.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/136 (41%), Positives = 91/136 (66%), Gaps = 7/136 (5%)
 Frame = -3

Query: 389 LSAQLLPILSTPNWEKHPSLKTLVPSISSTNLTCFFDENPCINPHVAVSFLDFVAKKPNF 210
           + AQL  ILS PNW+KHPSLK L+PSI+ ++++  F  N  ++P  A++F +++ +K  F
Sbjct: 49  IPAQLFSILSRPNWQKHPSLKNLIPSIAPSHISALFALN--LDPQTALAFFNWIGQKHGF 106

Query: 209 KANARLYASLLSILVQNKLVGMADKICVLMIKSCESIDDAKFVEGLLRGL-------EFR 51
           K N + + S+L+ILV N  + +A+ + +LMIKS +S ++A FV  +LR +       +F+
Sbjct: 107 KHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFK 166

Query: 50  VGVRCYNTLLMTLCRF 3
           + +RCYN LLM L RF
Sbjct: 167 LTLRCYNMLLMLLSRF 182


>ref|XP_002326371.1| predicted protein [Populus trichocarpa] gi|222833564|gb|EEE72041.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  106 bits (265), Expect = 3e-21
 Identities = 53/136 (38%), Positives = 86/136 (63%), Gaps = 8/136 (5%)
 Frame = -3

Query: 386 SAQLLPILSTPNWEKHPSLKTLVPSISSTNLTCFFDENPCINPHVAVSFLDFVAK-KPNF 210
           S   L ILS P W++HPS + L+P++S ++++  F+ +P +NP++A+ F + +   KP F
Sbjct: 57  SHHFLSILSHPKWQRHPSFQKLIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGF 116

Query: 209 KANARLYASLLSILVQNKLVGMADKICVLMIKSCESIDDAKFVEGLLR-------GLEFR 51
           K   + ++ LL IL+ N L G+ +KI + MIK+C S+DD +F+   LR        ++F+
Sbjct: 117 KHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFK 176

Query: 50  VGVRCYNTLLMTLCRF 3
           + VR YN LLM L RF
Sbjct: 177 LSVRSYNELLMMLARF 192


>ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata] gi|297328172|gb|EFH58591.1| hypothetical protein
           ARALYDRAFT_896436 [Arabidopsis lyrata subsp. lyrata]
          Length = 790

 Score =  103 bits (256), Expect = 3e-20
 Identities = 58/144 (40%), Positives = 88/144 (61%), Gaps = 8/144 (5%)
 Frame = -3

Query: 410 THPKIQS----LSAQLLPILSTPNWEKHPSLKTLVPSISSTNLTCFFDENPCINPHVAVS 243
           T P+ +S    L   LL ILS PNW+ +PSLK+L+P+I+ ++++  F  N  ++PH A+ 
Sbjct: 29  TPPEAESDPSHLPHHLLSILSKPNWQNNPSLKSLLPAITPSHVSSLFSLN--LDPHTALQ 86

Query: 242 FLDFVAKKPNFKANARLYASLLSILVQNKLVGMADKICVLMIKSCESIDDAKFVEGLLRG 63
           F  ++++ PNFK N   YASLL+++  +K+V    KI V MIK C S  DA FV  + R 
Sbjct: 87  FSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVSDICRK 146

Query: 62  LE----FRVGVRCYNTLLMTLCRF 3
           +      ++ ++CYN LL  L RF
Sbjct: 147 MSKDDITKLSLKCYNELLTLLARF 170


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