BLASTX nr result

ID: Angelica22_contig00039850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039850
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   108   3e-22
ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_002520617.1| pentatricopeptide repeat-containing protein,...   106   2e-21
ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21

>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   LTAHTHANLPKRTLSMFRDMVSVDGLQPDHFVFTSLVKACTSLGSLRMGLQVHARFLSSC 180
           LTAH  A +P+RTLSM   M + DGLQPDHFVF  +V+AC+SLG LR+G QVHARF+ S 
Sbjct: 76  LTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSX 135

Query: 181 YSNDDVVKSALVDMYAKCG 237
           + +D+VVKS+L+DMY KCG
Sbjct: 136 FCDDEVVKSSLIDMYTKCG 154


>ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/79 (63%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   LTAHTHANLPKRTLSMFRDMVSVDGLQPDHFVFTSLVKACTSLGSLRMGLQVHARFLSSC 180
           LTAH  A +P+RTLSM   M + DGLQPDHFVF  +V+AC+SLG LR+G QVHARF+ S 
Sbjct: 76  LTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSF 135

Query: 181 YSNDDVVKSALVDMYAKCG 237
           + +D+VVKS+L+DMY KCG
Sbjct: 136 FCDDEVVKSSLIDMYTKCG 154


>ref|XP_002520617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540178|gb|EEF41753.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 344

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/79 (64%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   LTAHTHANLPKRTLSMFRDMVSVDGLQPDHFVFTSLVKACTSLGSLRMGLQVHARFLSSC 180
           LTA+  ANLP +TLS+F  M  VD L+PDHFV+ +LVKAC SL ++R G QVHARF+ S 
Sbjct: 76  LTAYNLANLPNKTLSIFPTMFIVDKLEPDHFVYATLVKACASLCAVRQGKQVHARFVLSP 135

Query: 181 YSNDDVVKSALVDMYAKCG 237
           +S+DDVVKS+L+DMYAKCG
Sbjct: 136 FSDDDVVKSSLIDMYAKCG 154


>ref|XP_002298671.1| predicted protein [Populus trichocarpa] gi|222845929|gb|EEE83476.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = +1

Query: 1   LTAHTHANLPKRTLSMFRDMVSVDGLQPDHFVFTSLVKACTSLGSLRMGLQVHARFLSSC 180
           LTA+  A LP +TLS+F  M + D LQPDHFV+ +L+KAC SL SLR+G QVHARF+ S 
Sbjct: 75  LTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSP 134

Query: 181 YSNDDVVKSALVDMYAKCG 237
           + +DDVVKS+LVDMYAKCG
Sbjct: 135 FVDDDVVKSSLVDMYAKCG 153


>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/79 (65%), Positives = 60/79 (75%)
 Frame = +1

Query: 1   LTAHTHANLPKRTLSMFRDMVSVDGLQPDHFVFTSLVKACTSLGSLRMGLQVHARFLSSC 180
           LTA+  ANLP  TLSMF  M   DGLQPDH+VF  LVKAC  LG+++ G QVHA F+ S 
Sbjct: 76  LTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSP 135

Query: 181 YSNDDVVKSALVDMYAKCG 237
            S+DDVVKS+LVDMYAKCG
Sbjct: 136 VSDDDVVKSSLVDMYAKCG 154


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