BLASTX nr result

ID: Angelica22_contig00039758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039758
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,...   116   2e-24

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = -1

Query: 278 MPVHSLVACNTLIAGRAQRGLSEGALDQYNMMRMTGFRPDKITFVSVLSSCADLATIGQG 99
           MP  ++VA NTLIAGRAQ G  E  LDQYNMM+M GFRPDKITFVSV+SSC++LAT+GQG
Sbjct: 245 MPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQG 304

Query: 98  QQVHADAFKSGACXXXXXXXXXXSMYSRCGCL 3
           QQ+HA+  K+GA           SMYSRCGCL
Sbjct: 305 QQIHAEVIKAGASLIVSVISSLISMYSRCGCL 336


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = -1

Query: 278 MPVHSLVACNTLIAGRAQRGLSEGALDQYNMMRMTGFRPDKITFVSVLSSCADLATIGQG 99
           MP  ++VA NTLIAGRAQ G  E  LDQYNMM+M GFRPDKITFVSV+SSC++LAT+GQG
Sbjct: 245 MPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQG 304

Query: 98  QQVHADAFKSGACXXXXXXXXXXSMYSRCGCL 3
           QQ+HA+  K+GA           SMYSRCGCL
Sbjct: 305 QQIHAEVIKAGASLIVSVISSLISMYSRCGCL 336


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/92 (61%), Positives = 70/92 (76%)
 Frame = -1

Query: 278 MPVHSLVACNTLIAGRAQRGLSEGALDQYNMMRMTGFRPDKITFVSVLSSCADLATIGQG 99
           MP+ ++VA NTLIAG+AQ G  E  L+QYNMM+M GFRPDKITFVSVLS+C++LAT+GQG
Sbjct: 255 MPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQG 314

Query: 98  QQVHADAFKSGACXXXXXXXXXXSMYSRCGCL 3
           QQ+HA+  K+GA           SMYSR GCL
Sbjct: 315 QQIHAEVIKAGASSVLAVVSSLISMYSRSGCL 346


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/94 (61%), Positives = 71/94 (75%)
 Frame = -1

Query: 284 NGMPVHSLVACNTLIAGRAQRGLSEGALDQYNMMRMTGFRPDKITFVSVLSSCADLATIG 105
           N MP  SLVA NTL++G+AQ+G  EG LDQY MM+M GFRPDKITFVSV+SSC++LA + 
Sbjct: 260 NWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILC 319

Query: 104 QGQQVHADAFKSGACXXXXXXXXXXSMYSRCGCL 3
           QG+Q+HA+A K+GA           SMYSRCGCL
Sbjct: 320 QGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCL 353


>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 332

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/92 (60%), Positives = 68/92 (73%)
 Frame = -1

Query: 278 MPVHSLVACNTLIAGRAQRGLSEGALDQYNMMRMTGFRPDKITFVSVLSSCADLATIGQG 99
           MP  ++VA NTLIAG++Q G SE  LD YNMMR+ GFRPDKITF SV+SSC++L T+GQG
Sbjct: 150 MPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMMRIMGFRPDKITFASVISSCSELTTLGQG 209

Query: 98  QQVHADAFKSGACXXXXXXXXXXSMYSRCGCL 3
           QQ+HA+  K+GA           SMYSRCGCL
Sbjct: 210 QQIHAEVIKAGASSVVAVTSSLISMYSRCGCL 241


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