BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039752
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 218   3e-55
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   215   3e-54
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       215   3e-54
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   214   4e-54
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]        214   4e-54

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  218 bits (556), Expect = 3e-55
 Identities = 100/130 (76%), Positives = 115/130 (88%)
 Frame = +2

Query: 2    NKAAQRCNPLESKELQRQVQELIDKGYVRESKSPCDVPALLVPKKDGTWRMCIDSRAINN 181
            NK A RC+P  +KELQ Q++EL+ KG+VRES SPC VPALLVPKKDGTWRMC DSRAINN
Sbjct: 618  NKPAYRCDPNATKELQHQIEELMAKGFVRESLSPCAVPALLVPKKDGTWRMCTDSRAINN 677

Query: 182  ITIKYRFPMPRLDDMLDELHGSTIFSKIDMRSGYHQMRIRDGDEWKIAFKTKQRLYEWMV 361
            IT+KYRFP+PRLDDMLDEL G++IFSKID+R GYHQ+RIR+GDEWK AFKTK  LYEW+V
Sbjct: 678  ITVKYRFPIPRLDDMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLYEWLV 737

Query: 362  LPFGLCNAPS 391
            +PFGL NAPS
Sbjct: 738  MPFGLSNAPS 747


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  215 bits (547), Expect = 3e-54
 Identities = 99/130 (76%), Positives = 114/130 (87%)
 Frame = +2

Query: 2    NKAAQRCNPLESKELQRQVQELIDKGYVRESKSPCDVPALLVPKKDGTWRMCIDSRAINN 181
            N+A  R NP E+KE+QRQVQEL+DKGYVRES SPC VP LLVPKKDG+WRMC+D RAINN
Sbjct: 748  NRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINN 807

Query: 182  ITIKYRFPMPRLDDMLDELHGSTIFSKIDMRSGYHQMRIRDGDEWKIAFKTKQRLYEWMV 361
            ITI+YR P+PRLDDMLDEL GS +FSKID+RSGYHQ+R++ GDEWK AFKTK  LYEW+V
Sbjct: 808  ITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLV 867

Query: 362  LPFGLCNAPS 391
            +PFGL NAPS
Sbjct: 868  MPFGLTNAPS 877


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  215 bits (547), Expect = 3e-54
 Identities = 99/130 (76%), Positives = 114/130 (87%)
 Frame = +2

Query: 2    NKAAQRCNPLESKELQRQVQELIDKGYVRESKSPCDVPALLVPKKDGTWRMCIDSRAINN 181
            N+A  R NP E+KE+QRQVQEL+DKGYVRES SPC VP LLVPKKDG+WRMC+D RAINN
Sbjct: 748  NRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWRMCVDCRAINN 807

Query: 182  ITIKYRFPMPRLDDMLDELHGSTIFSKIDMRSGYHQMRIRDGDEWKIAFKTKQRLYEWMV 361
            ITI+YR P+PRLDDMLDEL GS +FSKID+RSGYHQ+R++ GDEWK AFKTK  LYEW+V
Sbjct: 808  ITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLV 867

Query: 362  LPFGLCNAPS 391
            +PFGL NAPS
Sbjct: 868  MPFGLTNAPS 877


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  214 bits (546), Expect = 4e-54
 Identities = 98/130 (75%), Positives = 114/130 (87%)
 Frame = +2

Query: 2    NKAAQRCNPLESKELQRQVQELIDKGYVRESKSPCDVPALLVPKKDGTWRMCIDSRAINN 181
            N+A  R NP E+KE+QRQVQEL+DKGYVRES SPC +P LLVPKKDG+WRMC+D RAINN
Sbjct: 748  NRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINN 807

Query: 182  ITIKYRFPMPRLDDMLDELHGSTIFSKIDMRSGYHQMRIRDGDEWKIAFKTKQRLYEWMV 361
            ITI+YR P+PRLDDMLDEL GS +FSKID+RSGYHQ+R++ GDEWK AFKTK  LYEW+V
Sbjct: 808  ITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLV 867

Query: 362  LPFGLCNAPS 391
            +PFGL NAPS
Sbjct: 868  MPFGLTNAPS 877


>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
          Length = 1239

 Score =  214 bits (546), Expect = 4e-54
 Identities = 99/130 (76%), Positives = 114/130 (87%)
 Frame = +2

Query: 2   NKAAQRCNPLESKELQRQVQELIDKGYVRESKSPCDVPALLVPKKDGTWRMCIDSRAINN 181
           N+A  R NP E+KE+QRQVQEL+DKGYVRES SPC VP LLVPKKDG+WRMC+D RAINN
Sbjct: 526 NRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVLLVPKKDGSWRMCVDCRAINN 585

Query: 182 ITIKYRFPMPRLDDMLDELHGSTIFSKIDMRSGYHQMRIRDGDEWKIAFKTKQRLYEWMV 361
           ITI+YR P+PRLDDMLDEL GS +FSKID+RSGYHQ+R++ GDEWK AFKTK  LYEW+V
Sbjct: 586 ITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFSLYEWLV 645

Query: 362 LPFGLCNAPS 391
           +PFGL NAPS
Sbjct: 646 MPFGLTNAPS 655