BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039723
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    88   8e-16
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...    88   8e-16
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    88   8e-16
ref|XP_003621136.1| Pentatricopeptide repeat-containing protein ...    82   3e-14
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    79   4e-13

>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = -3

Query: 337 WTHSKNGKYTVKSGYFQWCQQHLIGNEVQQSRG-WSVIWKLEVPHKTKVFLWRFCRNTLP 161
           W    +GKY+V+S Y   C + LI     +  G WS IW+L+VP K K F+WR CR  LP
Sbjct: 135 WKAENDGKYSVRSAY-TLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLP 193

Query: 160 VRNRLRGRGIQTPIICSMCTGEIEHLRHLFFECQF 56
            RN+LR +G+Q P  C  C+   E ++HLF  C F
Sbjct: 194 TRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTF 228


>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/98 (37%), Positives = 58/98 (59%)
 Frame = -3

Query: 337 WTHSKNGKYTVKSGYFQWCQQHLIGNEVQQSRGWSVIWKLEVPHKTKVFLWRFCRNTLPV 158
           W   K+G Y+++S Y      +   N+ + +  W+ IW L++P K K F+WR CRN LP 
Sbjct: 180 WRFEKDGNYSIRSAYCDILNNNTALNQHRVNGSWNSIWNLKLPPKVKNFMWRACRNCLPT 239

Query: 157 RNRLRGRGIQTPIICSMCTGEIEHLRHLFFECQFARTC 44
           R +L+ RG+Q P+ C++  G  E   HLFF+C  + +C
Sbjct: 240 RVKLQSRGVQCPMDCAVYAGPYEDSSHLFFDCGKSISC 277


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = -3

Query: 337 WTHSKNGKYTVKSGYFQWCQQHLIGNEVQQSRG-WSVIWKLEVPHKTKVFLWRFCRNTLP 161
           W    +GKY+V+S Y   C + LI     +  G WS IW+L+VP K K F+WR CR  LP
Sbjct: 228 WKAENDGKYSVRSAY-TLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVLP 286

Query: 160 VRNRLRGRGIQTPIICSMCTGEIEHLRHLFFECQF 56
            RN+LR +G+Q P  C  C+   E ++HLF  C F
Sbjct: 287 TRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTF 321


>ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496151|gb|AES77354.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 821

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = -3

Query: 337 WTHSKNGKYTVKSGYFQWCQQHLIGNEVQQSRG-WSVIWKLEVPHKTKVFLWRFCRNTLP 161
           W   KNGKY+V+S Y + C + +I     +  G WS IWKL+VP K K  +WR CR  LP
Sbjct: 515 WKAEKNGKYSVRSVY-RLCVEEIIDTSYLRRPGEWSAIWKLKVPPKVKNLVWRMCRGCLP 573

Query: 160 VRNRLRGRGIQTPIICSMCTGEIEHLRHLFFECQFA 53
            R RL+ +G+  P  C  C    E +  + F C FA
Sbjct: 574 TRIRLQDKGVNCPTNCESCDSANEDMADVMFVCPFA 609


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -3

Query: 337 WTHSKNGKYTVKSGYFQWCQQHLIGNEVQQSRG-WSVIWKLEVPHKTKVFLWRFCRNTLP 161
           W   KNG Y+VKS Y + C + ++ N   +  G WS IW+L+VP + K  +WR CR   P
Sbjct: 23  WKVEKNGCYSVKSAY-RVCVEDVVNNAHLRKPGYWSGIWRLKVPPRVKKLVWRVCRECFP 81

Query: 160 VRNRLRGRGIQTPIICSMCTGEIEHLRHLFFECQFA 53
            R RL  RG+  P  C  C    E   H+FF C+ A
Sbjct: 82  TRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTA 117