BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039711
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             145   3e-33
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   143   2e-32
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   142   2e-32
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             141   6e-32
ref|ZP_10246603.1| putative RNA-directed DNA polymerase [Nitrola...   138   5e-31

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/100 (69%), Positives = 79/100 (79%)
 Frame = -1

Query: 304 GYNQILMHGPDQEHTSFITDRGLYCYIGMPFGLLNAGATYQRLVNMMFERQIGKTMEVYV 125
           G NQI+M+  DQE TSFITDRG+YCY  MPFGL NAGATYQRLVN MF   +GKTMEVY+
Sbjct: 116 GSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYI 175

Query: 124 DDMLVKSKEAGDHIGHLTEMFDILRKYRMKLSPQKCVFGL 5
           DDMLVKS +  DH+ HL E F IL KY+MKL+P KC FG+
Sbjct: 176 DDMLVKSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGV 215


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/100 (68%), Positives = 75/100 (75%)
 Frame = -1

Query: 304 GYNQILMHGPDQEHTSFITDRGLYCYIGMPFGLLNAGATYQRLVNMMFERQIGKTMEVYV 125
           GYNQI MH  DQE TSFI DRG YCY  MPFGL N GA YQRLVN MF  Q+GKTMEVY+
Sbjct: 592 GYNQIPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGKTMEVYI 651

Query: 124 DDMLVKSKEAGDHIGHLTEMFDILRKYRMKLSPQKCVFGL 5
           DDMLVKS  + DHI HL   F+ L KY MKL+P KC+FG+
Sbjct: 652 DDMLVKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGV 691


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/100 (66%), Positives = 78/100 (78%)
 Frame = -1

Query: 304 GYNQILMHGPDQEHTSFITDRGLYCYIGMPFGLLNAGATYQRLVNMMFERQIGKTMEVYV 125
           GYNQI+M+  DQE T FITDRG+YCY  MPFGL NAGATY RLVN MF   +GKTMEVY+
Sbjct: 559 GYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNAGATYPRLVNKMFSEHVGKTMEVYI 618

Query: 124 DDMLVKSKEAGDHIGHLTEMFDILRKYRMKLSPQKCVFGL 5
           DDML+KS +  DH+ HL E F IL +Y+MKL+P KC FG+
Sbjct: 619 DDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKCTFGV 658


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/100 (66%), Positives = 77/100 (77%)
 Frame = -1

Query: 304  GYNQILMHGPDQEHTSFITDRGLYCYIGMPFGLLNAGATYQRLVNMMFERQIGKTMEVYV 125
            GYNQILMH  DQE TSF+TDRG YCY  M FGL NAGATYQR VN M   QIG+T+EVY+
Sbjct: 919  GYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYI 978

Query: 124  DDMLVKSKEAGDHIGHLTEMFDILRKYRMKLSPQKCVFGL 5
            DDMLVKS +  DH+ HL++ FD+L  Y MKL+P KC FG+
Sbjct: 979  DDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGV 1018


>ref|ZP_10246603.1| putative RNA-directed DNA polymerase [Nitrolancetus hollandicus Lb]
           gi|390170668|emb|CCF85946.1| putative RNA-directed DNA
           polymerase [Nitrolancetus hollandicus Lb]
          Length = 178

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/95 (69%), Positives = 74/95 (77%)
 Frame = -1

Query: 304 GYNQILMHGPDQEHTSFITDRGLYCYIGMPFGLLNAGATYQRLVNMMFERQIGKTMEVYV 125
           GYNQI+M+  DQE TSFITDRG+YCY  MPFGL NAGATYQRLVN MF   +GKTMEVY+
Sbjct: 64  GYNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYI 123

Query: 124 DDMLVKSKEAGDHIGHLTEMFDILRKYRMKLSPQK 20
           DDMLVKS +  DH+ HL E FDIL KYR +  P K
Sbjct: 124 DDMLVKSLKKEDHVKHLEECFDILNKYRNEAEPGK 158