BLASTX nr result

ID: Angelica22_contig00039658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039658
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314140.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ...    69   7e-10
emb|CBI31214.3| unnamed protein product [Vitis vinifera]               69   7e-10
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ...    67   3e-09
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ...    67   3e-09

>ref|XP_002314140.1| predicted protein [Populus trichocarpa] gi|222850548|gb|EEE88095.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 78.2 bits (191), Expect = 9e-13
 Identities = 45/125 (36%), Positives = 68/125 (54%)
 Frame = +2

Query: 197 CSFCGKVLCEYNCLEEVPFAKNAAIQYKEKSGVGGTNKDEKVHRENAKTDLGGATKHVAI 376
           C  C  ++  ++   + P  +NA  Q  +KS +     D         ++L  AT H+A 
Sbjct: 285 CKDCYAIVIGFDGGTDPPAFQNAESQRMKKSSIRHNVSD---------SNLVTATGHLA- 334

Query: 377 XXXXXXXXXXXNESHGSNKMRGESGEEFDTFSDIDDLEIESYIHSEKEKHYKKIIWEELN 556
                      ++ HG   M  ++ +E D FSDIDD E++SY+H+E+EK YKKIIWEE+N
Sbjct: 335 --------NDFDKLHGVGDMSSKAFDESDGFSDIDDAEVDSYLHNEEEKRYKKIIWEEMN 386

Query: 557 REYIQ 571
           REY+Q
Sbjct: 387 REYLQ 391


>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
           vinifera]
          Length = 529

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 25/54 (46%), Positives = 43/54 (79%)
 Frame = +2

Query: 410 NESHGSNKMRGESGEEFDTFSDIDDLEIESYIHSEKEKHYKKIIWEELNREYIQ 571
           ++ HG++     +G+E ++ SDIDD+E++ Y+H+EKEK +KKIIWE +N+EY++
Sbjct: 402 SDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYLE 455


>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 25/54 (46%), Positives = 43/54 (79%)
 Frame = +2

Query: 410 NESHGSNKMRGESGEEFDTFSDIDDLEIESYIHSEKEKHYKKIIWEELNREYIQ 571
           ++ HG++     +G+E ++ SDIDD+E++ Y+H+EKEK +KKIIWE +N+EY++
Sbjct: 402 SDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYLE 455


>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 663

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 25/50 (50%), Positives = 42/50 (84%)
 Frame = +2

Query: 422 GSNKMRGESGEEFDTFSDIDDLEIESYIHSEKEKHYKKIIWEELNREYIQ 571
           G++ +   + ++ + +SDIDD+E++ Y+H+E+EKHYKKIIWEE+NREY++
Sbjct: 449 GADDLGTCASDDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLE 498


>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 643

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 25/50 (50%), Positives = 42/50 (84%)
 Frame = +2

Query: 422 GSNKMRGESGEEFDTFSDIDDLEIESYIHSEKEKHYKKIIWEELNREYIQ 571
           G++ +   + ++ + +SDIDD+E++ Y+H+E+EKHYKKIIWEE+NREY++
Sbjct: 449 GADDLGTCASDDSENWSDIDDVEVDGYLHNEEEKHYKKIIWEEMNREYLE 498


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