BLASTX nr result

ID: Angelica22_contig00039514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039514
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   132   2e-29
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   131   6e-29
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   125   4e-27
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   124   6e-27
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   121   5e-26

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  132 bits (333), Expect = 2e-29
 Identities = 68/141 (48%), Positives = 91/141 (64%)
 Frame = +3

Query: 6    WEVLRQEIESSTELQKIKGCLRGSEHEYTGFMIHEGMLMYKDRIVIPRTSVFIPKLMHQY 185
            W  LR+EI   + L +++  L+      + F + +G L++K R VIP +S  IPKL+++Y
Sbjct: 1119 WAELRREITGDSFLTQVRKELQEGRTP-SHFTLVDGNLLFKGRYVIPSSSTIIPKLLYEY 1177

Query: 186  HDSVVGGHAGELKIYLRLAKECFWWGMRRDVKXXXXXXXXXXXXXXXXLSPVGLLQPLPI 365
            HD+ +GGHAGELK YLRLA E +W GMR++V                   P GLLQPLPI
Sbjct: 1178 HDAPMGGHAGELKTYLRLAAEWYWRGMRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPI 1237

Query: 366  PSQVWEDLTMDFIEGMPVSKG 428
            PS VWED++MDFIEG+PVSKG
Sbjct: 1238 PSLVWEDISMDFIEGLPVSKG 1258


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  131 bits (329), Expect = 6e-29
 Identities = 60/142 (42%), Positives = 90/142 (63%)
 Frame = +3

Query: 9    EVLRQEIESSTELQKIKGCLRGSEHEYTGFMIHEGMLMYKDRIVIPRTSVFIPKLMHQYH 188
            +V+ +E++   +L+ I   L         + I +G L YK R+V+P+TS  +P ++H +H
Sbjct: 812  KVVEKEVQEDDKLKDIFEQLLKDPDSIPRYSIKQGRLFYKGRLVLPKTSSLLPTILHTFH 871

Query: 189  DSVVGGHAGELKIYLRLAKECFWWGMRRDVKXXXXXXXXXXXXXXXXLSPVGLLQPLPIP 368
            D VVGGH+G+L+ Y R+A E +W GM+ D+K                LSP GLLQPLPIP
Sbjct: 872  DLVVGGHSGQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIP 931

Query: 369  SQVWEDLTMDFIEGMPVSKGFN 434
            S++WED++MDFIEG+P S+ F+
Sbjct: 932  SRIWEDISMDFIEGLPRSRTFD 953


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/141 (41%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
 Frame = +3

Query: 12   VLRQEIESSTELQKIKGCLR-GSEHEYTGFMIHEGMLMYKDRIVIPRTSVFIPKLMHQYH 188
            V+++E+E    L+K+   L+ G E+    F I  GML YKDR+V+ ++S  IP +++ YH
Sbjct: 1967 VVKKEVEEDIRLRKVWDELQSGEENTERKFSIRHGMLRYKDRLVLSQSSALIPAILYTYH 2026

Query: 189  DSVVGGHAGELKIYLRLAKECFWWGMRRDVKXXXXXXXXXXXXXXXXLSPVGLLQPLPIP 368
            DSV+GGH+G L+ Y R+  E +W GM+ D+K                L+P GLL PL +P
Sbjct: 2027 DSVIGGHSGFLRTYKRITGELYWAGMKTDIKRYCDECLICQKNKSLALTPAGLLLPLEVP 2086

Query: 369  SQVWEDLTMDFIEGMPVSKGF 431
            + +W D++MDFIEG+P S GF
Sbjct: 2087 TNIWSDISMDFIEGLPKSCGF 2107


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/138 (42%), Positives = 84/138 (60%)
 Frame = +3

Query: 12   VLRQEIESSTELQKIKGCLRGSEHEYTGFMIHEGMLMYKDRIVIPRTSVFIPKLMHQYHD 191
            ++  ++E+   L KIK  L      Y  + +  G+L+YK R+V+P+ S  +P L+ + H 
Sbjct: 1668 LISSQVEADPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPKASPLVPALLQEGHA 1727

Query: 192  SVVGGHAGELKIYLRLAKECFWWGMRRDVKXXXXXXXXXXXXXXXXLSPVGLLQPLPIPS 371
            SVVGGH+G L  Y RL ++ FW GM+ D+K                LSP GLLQPLPIP 
Sbjct: 1728 SVVGGHSGFLXTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQNKTLTLSPAGLLQPLPIPD 1787

Query: 372  QVWEDLTMDFIEGMPVSK 425
            ++W+D+TMDFIEG+P S+
Sbjct: 1788 KIWDDVTMDFIEGLPKSE 1805


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/141 (40%), Positives = 87/141 (61%)
 Frame = +3

Query: 9    EVLRQEIESSTELQKIKGCLRGSEHEYTGFMIHEGMLMYKDRIVIPRTSVFIPKLMHQYH 188
            ++LR+E+   ++LQKI G L+       G+M+ +G+L+Y+ R+V+   SV IP L+ ++H
Sbjct: 811  KLLREELSRDSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTLLAEFH 870

Query: 189  DSVVGGHAGELKIYLRLAKECFWWGMRRDVKXXXXXXXXXXXXXXXXLSPVGLLQPLPIP 368
             +  GGH+G  + Y RLA   +W GM+  V+                 SP GLLQPLP+P
Sbjct: 871  STPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQPLPVP 930

Query: 369  SQVWEDLTMDFIEGMPVSKGF 431
             ++WEDL+MDFI G+P SKG+
Sbjct: 931  DRIWEDLSMDFIMGLPKSKGY 951


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