BLASTX nr result

ID: Angelica22_contig00039376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039376
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   120   3e-25
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...   109   4e-22
gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold ...    96   4e-18
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    88   2e-15
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    86   6e-15

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  120 bits (300), Expect = 3e-25
 Identities = 67/212 (31%), Positives = 109/212 (51%)
 Frame = -2

Query: 649 IVLSSIWFARNQKIWENKILTPAIAVEVGIKQVKDWQDAMARKEKFNSLANRPVMQVPLT 470
           ++L  IW  RN K+W+ ++    IAV++  + +  WQ   AR      +   P  Q  + 
Sbjct: 1   MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQ--AARNSATTQVQQSP--QDTIA 56

Query: 469 WQPPSAGCYKLNVDASVFNGESSFSIGMVLRDDHGYFVKGKNMRLSGEVTVMEAEARGVQ 290
           WQPP+AG  K NVDA++F+ ++ F  GM +RD  G F+K       G     EAEA G++
Sbjct: 57  WQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLR 116

Query: 289 EAINWIDDLRLQGVSIESDAQLVVKAVNSHSEYYLEVGHTLEYCKTKLKDRPDLSLCHVK 110
           +AI W+  L L  V +E D +LVV ++   +    E G  ++ C++ L+   +  +  V+
Sbjct: 117 DAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVR 176

Query: 109 KHINRAAHLLARVECMVDCYNVFESPPNVLLE 14
           +  N  AH  ARV      + +  + P  +LE
Sbjct: 177 RQANVVAHSFARVSIFQPLFGLAFAKPESILE 208


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score =  109 bits (273), Expect = 4e-22
 Identities = 69/201 (34%), Positives = 98/201 (48%)
 Frame = -2

Query: 622 RNQKIWENKILTPAIAVEVGIKQVKDWQDAMARKEKFNSLANRPVMQVPLTWQPPSAGCY 443
           RN  +WE ++  PA  V   +  + DW  A + +   N      VM   LT  PP  G  
Sbjct: 120 RNLCLWEGQLQQPAQTVFCALSFLCDWASACSLQRNGNEAR---VMLEVLTCCPPQPGFV 176

Query: 442 KLNVDASVFNGESSFSIGMVLRDDHGYFVKGKNMRLSGEVTVMEAEARGVQEAINWIDDL 263
           K NVD +VF        GMV+RD  G FV G +    G   V  AEA G++EA+ W+  L
Sbjct: 177 KCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSL 236

Query: 262 RLQGVSIESDAQLVVKAVNSHSEYYLEVGHTLEYCKTKLKDRPDLSLCHVKKHINRAAHL 83
               V  E DA++VV AV S +    E G  +  C+  L+   + S+  ++K  N  AH 
Sbjct: 237 GRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHS 296

Query: 82  LARVECMVDCYNVFESPPNVL 20
           LAR   + D +N+F  PP+ +
Sbjct: 297 LARASHLQDGFNMFSVPPDCI 317


>gb|ABN09176.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 260

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 64/215 (29%), Positives = 103/215 (47%)
 Frame = -2

Query: 649 IVLSSIWFARNQKIWENKILTPAIAVEVGIKQVKDWQDAMARKEKFNSLANRPVMQVPLT 470
           + L S+W  RN K+W+N + TP++ V     + +D     +  +  N+L           
Sbjct: 48  MTLWSLWKCRNSKLWDN-VDTPSLVV---CNRARDTLYEWSYMQHANNLVQEITHDA--L 101

Query: 469 WQPPSAGCYKLNVDASVFNGESSFSIGMVLRDDHGYFVKGKNMRLSGEVTVMEAEARGVQ 290
           W+ P     K NV+ ++FN  S    G+  RD  G+F+ G +      VT  EAEA G+ 
Sbjct: 102 WEKPPLTVVKCNVECALFNNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTPSEAEATGLL 161

Query: 289 EAINWIDDLRLQGVSIESDAQLVVKAVNSHSEYYLEVGHTLEYCKTKLKDRPDLSLCHVK 110
           EA+       +Q V  +SD ++VV AVNS    + E+G  + YCK  L    + S+  V+
Sbjct: 162 EAVKLAIARGMQSVIFKSDCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHANFSVRFVR 221

Query: 109 KHINRAAHLLARVECMVDCYNVFESPPNVLLETIL 5
           +  N+ AH +AR        ++F   P+ L   +L
Sbjct: 222 RQANKVAHNIARASLSHPSPHIFFDVPSSLNTLLL 256


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
 Frame = -2

Query: 646  VLSSIWFARNQKIWENKILTPAIAVEVGIKQVKDWQDAMARKEKFNSLANRPVMQVPLTW 467
            V+ SIW  RN  IW N+++T A   + G+  +  WQ+A                     W
Sbjct: 1523 VMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQD------------------IW 1564

Query: 466  QPPSAGCYKLNVDASVFNGESSFSIGMVLRDDHGYFVKGKNMRLSGEVTVMEAEARGVQE 287
            + P  G +K NVDA+ F   +   IG+ +RDD G  VK +    +  + V E EA G+  
Sbjct: 1565 RKPDEGHFKCNVDAAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLY 1624

Query: 286  AINWIDDLRLQGVSIESDAQLVVKAVNSHSEYYLEVGHTLEYCKTKLKD-RPDLSLCHVK 110
            AI W  +  L  ++ E D++ VV + ++      ++G  +  C+T       +  +  ++
Sbjct: 1625 AIRWAKEQNLNNITFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFIR 1684

Query: 109  KHINRAAHLLARVECMVDCYNVFESPPNVLLETIL 5
            +  N   H LAR        + F   P+ + + ++
Sbjct: 1685 RQANEVVHSLARAATFYASIHYFTVLPDCIQDVLI 1719


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 18/231 (7%)
 Frame = -2

Query: 646 VLSSIWFARNQKIWENKILTPAIAVEVGIKQVKDWQDAMARKEKFNSLANRPVMQVPLT- 470
           ++ SIW +RN K+W+    +    +E     ++ W+ A   K+      + P    P T 
Sbjct: 162 IMWSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRKAN-HKQGLLGQVHSPTNSRPQTH 220

Query: 469 -------------WQPPSAGCYKLNVDASVFNGESSFSIGMVLRDDHGYFVKGKNMRLSG 329
                        W+ P +G  K NVDAS     +   IGM +RD  G  V+ K M  S 
Sbjct: 221 DSQNTDNRYGNIRWRKPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSP 280

Query: 328 EVTVMEAEARGVQEAINWIDDLRLQGVSIESDAQLVV----KAVNSHSEYYLEVGHTLEY 161
              V   EA G+  A  WI++L+L  V  E D++ +     KA   ++E+   + +T+++
Sbjct: 281 LCPVNIGEALGLYHATRWINELQLTNVDFEVDSKTIADYFNKARGDNTEFGSIMENTIQF 340

Query: 160 CKTKLKDRPDLSLCHVKKHINRAAHLLARVECMVDCYNVFESPPNVLLETI 8
           C   L +     +   ++  N  AH LA+   +   +++F+  P  + + I
Sbjct: 341 CNIFLTNS---HVEFTRRQANEVAHELAKAATLGPSFHIFDESPTCISDLI 388


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