BLASTX nr result

ID: Angelica22_contig00039359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039359
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago t...    85   7e-15
ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14

>ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355484604|gb|AES65807.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 1040

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/78 (47%), Positives = 58/78 (74%)
 Frame = -2

Query: 234 LHQNPTLASKLIDNYTNLGLFKQAQQVFYSCTNPNPIVYNSYICNLYKVGEFKKTLVVYQ 55
           LHQN +L+SKLID+Y+N GL   + ++F    NP+ I+YN+++ NL+  GE++KTL +Y+
Sbjct: 49  LHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGEYEKTLFLYK 108

Query: 54  EMIKKCVCLDENAYFFVL 1
           EM++K +C DE+  F VL
Sbjct: 109 EMVQKSMCPDEDCCFSVL 126


>ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 706

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = -2

Query: 231 HQNPTLASKLIDNYTNLGLFKQAQQVFYSCTNPNPIVYNSYICNLYKVGEFKKTLVVYQE 52
           HQNPTL+SKLID Y NLGL   + QVF S  +PN  ++N+ + NL + GE ++TL+VYQ+
Sbjct: 56  HQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQ 115

Query: 51  MIKKCVCLDENAYFFVL 1
           M+ K +  DE  Y FVL
Sbjct: 116 MVAKSMHPDEETYPFVL 132


>ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = -2

Query: 231 HQNPTLASKLIDNYTNLGLFKQAQQVFYSCTNPNPIVYNSYICNLYKVGEFKKTLVVYQE 52
           HQNPTL+SKLID Y NLGL   + QVF S  +PN  ++N+ + NL + GE ++TL+VYQ+
Sbjct: 56  HQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQ 115

Query: 51  MIKKCVCLDENAYFFVL 1
           M+ K +  DE  Y FVL
Sbjct: 116 MVAKSMHPDEETYPFVL 132


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