BLASTX nr result

ID: Angelica22_contig00039329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039329
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    65   7e-09
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    60   1e-07
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002517203.1| hypothetical protein RCOM_0913810 [Ricinus c...    56   3e-06
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...    55   4e-06

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = -3

Query: 276 QVHVYSLKSNSWRKIGDFPYTLEIMACPATYVNGALYWICVKKTVASNFHNFIVAFDLAM 97
           +V VYSL+  SWR+IGD PY +        + NGAL+W+ V +   SN  N +VA DL +
Sbjct: 179 EVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWV-VGENPESNVANIVVALDLGV 237

Query: 96  EEYRVV 79
           E+YR V
Sbjct: 238 EDYREV 243


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 47/87 (54%)
 Frame = -3

Query: 276 QVHVYSLKSNSWRKIGDFPYTLEIMACPATYVNGALYWICVKKTVASNFHNFIVAFDLAM 97
           +V V+SL+ NSWR+I D PY +        Y NGAL+W+ V +   S   + IVA DL +
Sbjct: 172 EVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWL-VSQDPDSTVADTIVALDLGV 230

Query: 96  EEYRVVPALPVYDHDTSCFFSIYMGSI 16
           E+Y VVP     D + +    +  G +
Sbjct: 231 EDYHVVPKPEFVDMNCNMGVGVLQGCL 257


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
 Frame = -3

Query: 276 QVHVYSLKSNSWRKIGDFPYTLEIMACP----------ATYVNGALYWICVKKTVA---- 139
           +V VYSLKSNSW++I D+PY L  +  P            + N A++W   K TV     
Sbjct: 177 EVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHW---KATVVGKGK 233

Query: 138 SNFHNFIVAFDLAMEEYRVVP 76
            N  + IVAFDL  EE++++P
Sbjct: 234 ENGSDLIVAFDLGAEEFKIIP 254


>ref|XP_002517203.1| hypothetical protein RCOM_0913810 [Ricinus communis]
           gi|223543838|gb|EEF45366.1| hypothetical protein
           RCOM_0913810 [Ricinus communis]
          Length = 421

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 276 QVHVYSLKSNSWRKIGDFPYTLEIMACPATYVNGALYWICVKKTVASNFHNF---IVAFD 106
           QVHV+S+K N WR +G F Y++   A P   +NG LYW       AS FH F   I+ F+
Sbjct: 208 QVHVFSVKRNLWRNLGGFDYSVFYEAIP---LNGCLYW------GASKFHKFADRILCFN 258

Query: 105 LAMEEYRVVPALP 67
           L+ E +R VP+ P
Sbjct: 259 LSDETFREVPSPP 271


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = -3

Query: 273 VHVYSLKSNSWRKIGDFPYTLEIMACPATYVNGALYWICVKKTVASNFHNFIVAFDLAME 94
           V VYS+K NSWR +G FPY++ +   P   +NGA++W+ V ++  S     I AFDL  E
Sbjct: 171 VFVYSVKENSWRSVGGFPYSI-LALDPGIQLNGAIHWV-VSRSKDSTKSQIIGAFDLVEE 228

Query: 93  EYRVVPALPVYDHD 52
           ++  VP  PV  H+
Sbjct: 229 KFWDVPP-PVSVHN 241


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