BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039242
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   133   1e-29
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...    94   2e-17
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]    89   3e-16
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]    89   5e-16
gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subc...    89   5e-16

>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/77 (79%), Positives = 67/77 (87%)
 Frame = +1

Query: 1   RGGEYYDPVYFRSTGIIHQTTVPYTPQQNGVAERKNRTLKEMVNSLLSYLGLSEGFWGET 180
           RGGEYYDP YF+S GIIH+TT PYTPQQNGV ERKNR LKEMVNS+LSY GLS+GFWGE 
Sbjct: 524 RGGEYYDPTYFQSVGIIHETTAPYTPQQNGVFERKNRVLKEMVNSMLSYSGLSDGFWGEA 583

Query: 181 MLTTYYLLNRILSKRNK 231
           MLT  YLLNR+ +KRNK
Sbjct: 584 MLTACYLLNRVPNKRNK 600


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
 Frame = +1

Query: 1   RGGEYYDPV---YFRSTGIIHQTTVPYTPQQNGVAERKNRTLKEMVNSLLSYLGLSEGFW 171
           RGGEY D     +  S GIIH+ T PY+PQQNG+AERKNRTLKEM+N++L   GLS+  W
Sbjct: 594 RGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMW 653

Query: 172 GETMLTTYYLLNRILSKR 225
           GE +L+  ++LNRI  KR
Sbjct: 654 GEAVLSACFILNRIPHKR 671


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
 Frame = +1

Query: 1   RGGEYYDPVY--FRSTGIIHQTTVPYTPQQNGVAERKNRTLKEMVNSLLSYLGLSEGFWG 174
           RGGEY  P        GIIH+TT PY+PQ NGVAERKNRTLKEM+N++L    L +  WG
Sbjct: 598 RGGEYESPFVDICAQHGIIHETTTPYSPQSNGVAERKNRTLKEMMNAMLISFSLPQNMWG 657

Query: 175 ETMLTTYYLLNRILSKR 225
           E +LT  YLLN++  K+
Sbjct: 658 EAILTANYLLNKVPKKK 674


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/77 (55%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
 Frame = +1

Query: 1   RGGEYYDPVY--FRSTGIIHQTTVPYTPQQNGVAERKNRTLKEMVNSLLSYLGLSEGFWG 174
           RGGEY  P        GIIH+TT PY+PQ NGVAERKNRTLKEM+N++L    L +  WG
Sbjct: 598 RGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLPQNMWG 657

Query: 175 ETMLTTYYLLNRILSKR 225
           E +LT  YLLN++  K+
Sbjct: 658 EAILTANYLLNKVPKKK 674


>gb|ABF95769.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 991

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = +1

Query: 1   RGGEYYDPVYF---RSTGIIHQTTVPYTPQQNGVAERKNRTLKEMVNSLLSYLGLSEGFW 171
           RGGEY+   +       GIIH+ T PY+PQ NGVAERKNRTL EMVN++L   GLS+ +W
Sbjct: 341 RGGEYFSNEFISFCEEYGIIHERTAPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWW 400

Query: 172 GETMLTTYYLLNRILSKRNK 231
           GE +LT  ++LNRI +K  +
Sbjct: 401 GEAILTACHVLNRIPTKHKE 420