BLASTX nr result

ID: Angelica22_contig00039240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039240
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]    71   8e-11
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...    67   2e-09
ref|XP_002533225.1| pentatricopeptide repeat-containing protein,...    62   5e-08

>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = -3

Query: 258 TFGTVNESDSGSTGHSGHIKELCKNGKYEEAMQIVEELSQKGITLDKSTYTNLIGGLFKR 79
           T  T  ESDS S  +S  IKELC  GKY++AM+I  E  QKGIT+DKSTY NL+ GL KR
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769

Query: 78  EIS 70
             S
Sbjct: 770 RKS 772


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = -3

Query: 258 TFGTVNESDSGSTGHSGHIKELCKNGKYEEAMQIVEELSQKGITLDKSTYTNLIGGLFKR 79
           T  T  ESDS S  +S  IKELC  GKY++AM+I  E  QKGIT+DKSTY NL+ GL KR
Sbjct: 710 TSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769

Query: 78  EIS 70
             S
Sbjct: 770 RKS 772


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = -3

Query: 249 TVNESDSGSTGHSGHIKELCKNGKYEEAMQIVEELSQKGITLDKSTYTNLIGGLFKREIS 70
           T  ESD  S   S  I ELC  GKY++AM +V+E +QKGITL KSTY +L+ GL KR  S
Sbjct: 717 TSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKS 776

Query: 69  RVKAC 55
             ++C
Sbjct: 777 ISRSC 781


>ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526957|gb|EEF29157.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 605

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/57 (52%), Positives = 38/57 (66%)
 Frame = -3

Query: 249 TVNESDSGSTGHSGHIKELCKNGKYEEAMQIVEELSQKGITLDKSTYTNLIGGLFKR 79
           T  ESD  S   S  I ELC  GKY++AM +++E +QKGI L KSTY +L+ GL KR
Sbjct: 549 TSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605


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