BLASTX nr result

ID: Angelica22_contig00039206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039206
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    79   3e-13
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...    79   3e-13
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    79   4e-13
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]             79   4e-13

>ref|XP_002317615.1| predicted protein [Populus trichocarpa] gi|222860680|gb|EEE98227.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
 Frame = +1

Query: 1   YRS*KQSMEIQLLSKRKLGFVNGTETRSTTDAT----QWDTCNNMVISCLHNNISDSIKH 168
           Y +  +SM   L ++ KLGF++G   R T +       W+ CN+MV+S + N +S  IKH
Sbjct: 54  YITWSRSMRRALRARNKLGFISGNIVRPTNEEDPLFEMWERCNDMVVSWIQNAVSTDIKH 113

Query: 169 YIPFVNSATTVWKLLEQRYQLINGSRKYKLSRDLFSVKKNGMLLVEYFTALTAIWEELDV 348
            + FV+ A  VW  L  R+   NG R ++L RDL +++++   +  YF  L  +W+E+ V
Sbjct: 114 TLVFVDDAQMVWTELNDRFTQQNGHRIFQLRRDLATLRQDKDSVSSYFGNLKTLWDEMIV 173


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/112 (37%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
 Frame = +1

Query: 19  SMEIQLLSKRKLGFVNGTETR-STTDAT--QWDTCNNMVISCLHNNISDSIKHYIPFVNS 189
           +M+I L +K K+GFV+GT TR  T+D T   W  CN+MV S L N++S  I   I  +N 
Sbjct: 43  AMKIALDAKNKIGFVDGTLTRPDTSDPTFRLWSRCNSMVKSWLLNSVSPQIYRSILRLND 102

Query: 190 ATTVWKLLEQRYQLINGSRKYKLSRDLFSVKKNGMLLVEYFTALTAIWEELD 345
           A  +W+ L  R+ + N  R + L++++  +K+  M L +Y+T L  +W+ L+
Sbjct: 103 AADIWRDLHGRFHMTNLPRTFNLTQEIQDLKQGSMSLSDYYTTLKTLWDNLE 154


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
 Frame = +1

Query: 19  SMEIQLLSKRKLGFVNGTETR---STTDATQWDTCNNMVISCLHNNISDSIKHYIPFVNS 189
           +M I L +K KLGFV+G+  R   S  +   W  CN+MV S L N++S  I   I  +N 
Sbjct: 94  AMRISLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSPQIYRSILRLND 153

Query: 190 ATTVWKLLEQRYQLINGSRKYKLSRDLFSVKKNGMLLVEYFTALTAIWEELD 345
           AT +W+ L  R+ L N  R Y L++++  +++  M L EY+T L  +W++LD
Sbjct: 154 ATDIWRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWDQLD 205


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
 Frame = +1

Query: 1   YRS*KQSMEIQLLSKRKLGFVNGTETR---STTDATQWDTCNNMVISCLHNNISDSIKHY 171
           + S K +M + L +K K+ FV+GT  R   S      W  CN+MV S + N+++  I   
Sbjct: 86  FSSWKIAMFVSLYAKNKIAFVDGTLPRPPESDPSFRVWSRCNSMVKSWILNSVTKQIYKS 145

Query: 172 IPFVNSATTVWKLLEQRYQLINGSRKYKLSRDLFSVKKNGMLLVEYFTALTAIWEELD 345
           I   N A  +WK L+ R+ + N  R Y+L++ ++S+++  M L +Y+TAL  +W++LD
Sbjct: 146 ILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSLQQGTMSLSDYYTALKTLWDDLD 203


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
 Frame = +1

Query: 16  QSMEIQLLSKRKLGFVNGTETRSTTDAT---QWDTCNNMVISCLHNNISDSIKHYIPFVN 186
           ++M I LL +RK GFV G  TR+        QW+TCN +V+S L N +S+ +   I +  
Sbjct: 40  RAMRIALLGRRKYGFVTGACTRALYKDELHEQWETCNAIVLSWLMNTVSEELLSGIVYAT 99

Query: 187 SATTVWKLLEQRYQLINGSRKYKLSRDLFSVKKNGMLLVEYFTALTAIWEELDV 348
           ++ +VW  L++R+  +N  R Y+L RD+ ++ +    +  YF+ L  +W E DV
Sbjct: 100 NSCSVWNDLKERFDKVNRVRIYQLHRDITTLSQGTDSVSHYFSKLKTLWNEYDV 153


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