BLASTX nr result

ID: Angelica22_contig00039070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039070
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   120   2e-25
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   111   2e-22
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....   103   3e-20
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...   102   6e-20
ref|XP_002870718.1| zinc finger family protein [Arabidopsis lyra...    82   8e-14

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  120 bits (302), Expect = 2e-25
 Identities = 60/134 (44%), Positives = 78/134 (58%)
 Frame = -1

Query: 483 SPFDSSMVLTILVLLTALFFMGFFSIYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           +PFDSSM LT++VLLTALFFMGFFS+YI                                
Sbjct: 50  TPFDSSMALTVIVLLTALFFMGFFSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSPTPS 109

Query: 303 XXXXXXXXXXXSLPIVSYSAAASHPIDCIICLTEFEEKEKVKMIPCCKHVFHPGCIDTWL 124
                       LP+ SY   A   +DC +CLT+FE+K+ VK+IP C+HVFHP CIDTWL
Sbjct: 110 KGLDASTVSS--LPLFSYHGDAKETLDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWL 167

Query: 123 SSNVTCPLCRSSKM 82
           SS+V+CP+CRS+++
Sbjct: 168 SSHVSCPVCRSTQL 181


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  111 bits (277), Expect = 2e-22
 Identities = 60/133 (45%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = -1

Query: 480 PFDSSMVLTILVLLTALFFMGFFSIYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 301
           PFDSSM LT+LVLL+ALFFMGFFSIYI                                 
Sbjct: 45  PFDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEFTSHHPGPGTPSNQRPSRVVGGS 104

Query: 300 XXXXXXXXXXSLPIVSY-SAAASHPIDCIICLTEFEEKEKVKMIPCCKHVFHPGCIDTWL 124
                     SLP+ SY    A + I+C +CL EFEEKE VK IP CKH+FH  CI+TWL
Sbjct: 105 RKGLDPEVIKSLPVYSYYHGEAKYQIECAVCLGEFEEKETVKSIPYCKHMFHLECIETWL 164

Query: 123 SSNVTCPLCRSSK 85
             +VTCP+CR ++
Sbjct: 165 KLHVTCPVCRGTQ 177


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  103 bits (257), Expect = 3e-20
 Identities = 67/175 (38%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
 Frame = -1

Query: 558 RKLLQKHEINGTITNSTTQKHEHLTSP---------FDSSMVLTILVLLTALFFMGFFSI 406
           RKLLQ ++  G      T      + P          DSSM LTI VLL ALFFMGFFS+
Sbjct: 9   RKLLQLYQACGGEQELVTNVQNATSLPPPPPEPPSALDSSMALTIFVLLVALFFMGFFSV 68

Query: 405 YIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------LPIVSYSA 244
           YI                                                  LP+  Y+ 
Sbjct: 69  YIHHFVDDSTVEISSIPRTRSSRMSPRRLSTSVVVSRPYSYRRGLDSQTVRSLPVYHYTK 128

Query: 243 AASHPI-DCIICLTEFEEKEKVKMIPCCKHVFHPGCIDTWLSSNVTCPLCRSSKM 82
           A      DC+ICL+EFEE E VK+IP C HVFH  C+DTWLSS VTCPLCRS+++
Sbjct: 129 ATKQRNEDCVICLSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQL 183


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score =  102 bits (255), Expect = 6e-20
 Identities = 67/186 (36%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
 Frame = -1

Query: 576 MKANTYRKLLQ-------KHEINGTITNSTTQKHEHLTSP-----FDSSMVLTILVLLTA 433
           M+    RKLLQ       + E+  T+ N T+        P      DS+M LTI +LL A
Sbjct: 1   METKHLRKLLQLYQACGGEQELTKTVQNVTSSPLTPTPPPQPPSALDSTMALTIFILLVA 60

Query: 432 LFFMGFFSIYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL---- 265
           LFFMGFFS+Y                                             L    
Sbjct: 61  LFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQA 120

Query: 264 ----PIVSYSAAASHPI-DCIICLTEFEEKEKVKMIPCCKHVFHPGCIDTWLSSNVTCPL 100
               P+  Y+ AA     DC+ICL++FEE E VK+IP C HVFH  C+DTWLSS VTCPL
Sbjct: 121 VRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPL 180

Query: 99  CRSSKM 82
           CRS+++
Sbjct: 181 CRSNQL 186


>ref|XP_002870718.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316554|gb|EFH46977.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 32/57 (56%), Positives = 40/57 (70%)
 Frame = -1

Query: 258 VSYSAAASHPIDCIICLTEFEEKEKVKMIPCCKHVFHPGCIDTWLSSNVTCPLCRSS 88
           V  + AA  P DC +CL EF EK+K++++P C H FH  CIDTWL SN TCPLCR +
Sbjct: 130 VGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGT 186


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